Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00790 ATGTCCTCACCGGAAAATCTACCATTAGAAACCGCTCAAAAAATCATTCTCCGATGGGACTCAACCGCCTCCGAAGAAGCTCGCGAAAAAATGATCTTCGATCAAACCACCACAAATCGTGAAGAAATCGATCTTTATCTCCAAGCCGTTGATGAAATCCAACGCTCCATATCCTCCACCTCTCTCTCCGACGACCACCACACCAAACCTACCTCCACCATCCAGATCGCCATGGCTCGCTTAGAAGACGAGTTTCGTAACATCCTCATCTCTCATACAAATCCAATCGATCCTTCTTTGGATGAAGATTCTTCGTTTTCTTCAAAACGACTTAACGAAGATGAAGTTAGTTACGGCGGCGATAATGATGATGAAGATGATGATGATGATAAGCTTCTTCGTTTTGATTCTACTTGTTCTGTTGCTACAACAGCTTCTTCAAACTACCGATCAACTAGTAGCATCCGTGAGATCGATCTGATACCTTCTGAAGCAGTTTCCGATCTCCGGTGTATCGCCGATAGAATGATTTCATCCGGTTATCTTCGTGAATGTATTCAAGTTTATGGAAGTGTGAGAAAATCTGCTGTTGATTCGAGTTTTAAGAAACTCGGTGTTGAGAAATTGAGTATTGGTGATGTTCAGAGATTGGATTGGGAACAGTTAGAAACGAAGATTCGGAGATGGATTAGAGCGGCTAAGGTTTGTGTTCGAACGCTTTTCGCGAGTGAGAAAAGATTATGTGAACAGATTTTTGATGGAATTGGTACTTCTATTGATGATGCTTGTTTTATGGAAACTGTTAAAGGTCCTGCAATTCAGCTTTTCAATTTTGCTGAAGCTATTAGTATTAGTCGTAGATCGCCCGAAAAATTGTTTAAAATACTTGATCTTCATGATGCTTTAATGGATTTGATTCCTGATATTGATGCTGTTTTTGATTCTAAGTCGTCTGAATCCATTAGGGTTCAGGCGGCTGAGATTTTGTCGCGTTTAGCGGAAGCTGCTAGAGGGATTTTATCTGAATTTGAAAATGCTGTTCTTAAGGAACCTTCTAAGGTTCCTGTTCCTGGCGGAACGATTCATCCTTTGACTAGGTATGTTATGAATTATATAAGCTTGATTTCTGATTATAAGCAGACTTTGTATGAGCTTATAGTTTCGAAGCCTTTGAATGGTTCGAGGCATTCGGGTGACCCTTTGACTCCTGATATGGATTTCGATGAGGTTGAAGAGAAACCGCCTTTGGCTATTCATTTGATTTGGATCATTGTTATATTGCAATTTAATTTGGATGGTAAGTCAAAGCATTATAAAGATGCTTCTTTGTTGCATTTGTTTATAATGAACAATGTTCATTATATTGTTCAGAAGGTTAGAGGGTCGCCCGAGTTGAGGGAAATGATCGGGGATGATTATTTGAAGAAGTTGACTGGGAAATTTCGACAGGCTGCTACTAGCTATCAGAGAGCGACTTGGGTTAGGGTTTTGTCTTGTTTGAGAGATGAAGGGTTACATGTGAGTGGTGGATTTTCTTCTGGTGTGTCGAAGAGTGCTTTGAGGGAAAGGTTTAAGGCTTTTAATGCTATGTTTGAAGAGGTACATAGGACTCAAGCTGTCTGGTTGATACCGGATTCACAACTTAGGGAGGAGCTTCGGATTTCTATATCGGAGAAGCTGATTCCCGCGTATAGGTCTTTCCTTGGACGGTTCAGGAGCCATATCGAGAGTGGAAGGCATCCGGAGAATTACATTAAGTATTCTGTTGAGGATTTGGAGGACGCTGTTTTGGATTTTTTCGAAGGGATTCCTGTTTCGCAGCACACGAGAAGGAGATCTCAGTGA 1845 0.4108 MSSPENLPLETAQKIILRWDSTASEEAREKMIFDQTTTNREEIDLYLQAVDEIQRSISSTSLSDDHHTKPTSTIQIAMARLEDEFRNILISHTNPIDPSLDEDSSFSSKRLNEDEVSYGGDNDDEDDDDDKLLRFDSTCSVATTASSNYRSTSSIREIDLIPSEAVSDLRCIADRMISSGYLRECIQVYGSVRKSAVDSSFKKLGVEKLSIGDVQRLDWEQLETKIRRWIRAAKVCVRTLFASEKRLCEQIFDGIGTSIDDACFMETVKGPAIQLFNFAEAISISRRSPEKLFKILDLHDALMDLIPDIDAVFDSKSSESIRVQAAEILSRLAEAARGILSEFENAVLKEPSKVPVPGGTIHPLTRYVMNYISLISDYKQTLYELIVSKPLNGSRHSGDPLTPDMDFDEVEEKPPLAIHLIWIIVILQFNLDGKSKHYKDASLLHLFIMNNVHYIVQKVRGSPELREMIGDDYLKKLTGKFRQAATSYQRATWVRVLSCLRDEGLHVSGGFSSGVSKSALRERFKAFNAMFEEVHRTQAVWLIPDSQLREELRISISEKLIPAYRSFLGRFRSHIESGRHPENYIKYSVEDLEDAVLDFFEGIPVSQHTRRRSQ 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00790 614 MobiDBLite consensus disorder prediction 93 130 - -
Trre15g00790 614 PANTHER EXOCYST COMPLEX PROTEIN EXO70 9 602 IPR004140 GO:0000145|GO:0006887
Trre15g00790 614 MobiDBLite consensus disorder prediction 103 117 - -
Trre15g00790 614 FunFam Exocyst subunit Exo70 family protein 29 608 - -
Trre15g00790 614 Gene3D Exocyst complex component Exo70 15 610 - -
Trre15g00790 614 Pfam Exo70 exocyst complex subunit 228 596 IPR046364 GO:0000145|GO:0005546|GO:0006887
Trre15g00790 614 SUPERFAMILY Cullin repeat-like 40 601 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00790 Trre-Chr15 5835548 5837392 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00790 9 614 EXO70 exocyst subunit family AT1G72470 69.404 0.0 849
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00790 K07195 - gmx:100808671 959.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g00790 15 5835548 5837392 Trre15g00790 15 5835548 5837392 ECH