Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00778 ATGGAAAACTTACCCAAAGCATTACCGCCACTACCAAATATATTGCAGAGTGATAATTTGACCAAGTATATCCTGGAAAGCAGCGTTTATCCGCGAGAACATGAGACTCTCAAAGAGATAAGAAATGTCACTGCAAGCTGCTGCCCTATGCATTTCATAGGAACTTGTCCTGATGCTGGTCAGCTAATGGCCGTACTCTTGAAGTTGTTGAATGCTAAGAAGACAATTGAAGTCGGAGTTTTTACTGGATACTCTCTTCTCCTCACTGCACTTACCATTCCTGATGATGGAAAGATTATTGCTGTGGATCCAGACAGAAAATCTTATGAAATAGGACTTCCATCAATTAAAAAAGCTGGTGTAGAACACAAGATTGACTTCATAGAGTCTCAAGCTTTACCTATTCTTGATAAACTCTTAGAAGATCCTTCAAATGATGGAAATTTCGACTTTGCTTATGTTGATGCTGATAAACAAAATTATTGGAATTATCACGAGAGGCTTATTAAACTGATTAAGATTGGTGGATTAATTATCTATGATAACACTCTTTGGGGTGGAACTGTTGCATGGCCTGAAGAACTTGTTCCAGGTCCTATTAGAAATATAAGACAAGGTGCACTTGCTTTCAACAAAGCAATTGCAAGTGATTCTCGTATTGAAATTTCTCTTGTTTCAATTGGTGATGGCTTCACTATATGTAAGCGTACTCATTGA 717 0.378 MENLPKALPPLPNILQSDNLTKYILESSVYPREHETLKEIRNVTASCCPMHFIGTCPDAGQLMAVLLKLLNAKKTIEVGVFTGYSLLLTALTIPDDGKIIAVDPDRKSYEIGLPSIKKAGVEHKIDFIESQALPILDKLLEDPSNDGNFDFAYVDADKQNYWNYHERLIKLIKIGGLIIYDNTLWGGTVAWPEELVPGPIRNIRQGALAFNKAIASDSRIEISLVSIGDGFTICKRTH 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00778 238 CDD AdoMet_MTases 76 180 - -
Trre15g00778 238 PANTHER O-METHYLTRANSFERASE-RELATED 13 237 - -
Trre15g00778 238 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 17 236 IPR029063 -
Trre15g00778 238 Pfam O-methyltransferase 26 236 IPR002935 GO:0008171
Trre15g00778 238 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 13 237 IPR002935 GO:0008171
Trre15g00778 238 Gene3D Vaccinia Virus protein VP39 11 237 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00778 Trre-Chr15 5734717 5736591 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00778 14 238 Monolignol Biosynthesis Gene Families AT4G26220 63.111 3.55e-105 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00778 K00588 - gmx:100780516 365.155