Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00776 ATGACAACAACAATGATAAGTGATCCAATGATTGTATCAACACAAGAAACACAATCATCATCAACAAGCACACTAGTCTCACAAAATGAAGTTGAATTTGCAATATGTGAATGTTGTGGATTAACAGAAGAGTGCACACCAGCATACATAGAAAGAATCAGAGAAAGGTATCAAGGAAAATGGGTTTGTGGATTATGTGGTGAAGCAGTTAAAGATGAAATTTTAAGGTCAGAAAGACTTGTAAGTACAGAAGAAGCAATGACAAAACATATGAATTTTTGTAAAAAATTCAACACTTCTGGTCCTCCTCCAAATCCAGCAGTTCATTTGATATCAGCTATGAGACAAATTCTTAGGAGGAGTTTGGTTAGGTCTACACCAAGTAGTCCAATTAATAAGACTAGTAGAGAAATTCATGGTTCTGGACTTGCTAGGTCTGAAAGTTGCTTCTCTTCTCTAACCGGTTCTTGA 471 0.3588 MTTTMISDPMIVSTQETQSSSTSTLVSQNEVEFAICECCGLTEECTPAYIERIRERYQGKWVCGLCGEAVKDEILRSERLVSTEEAMTKHMNFCKKFNTSGPPPNPAVHLISAMRQILRRSLVRSTPSSPINKTSREIHGSGLARSESCFSSLTGS 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00776 156 Pfam Protein of unknown function (DUF1677) 31 120 IPR012876 -
Trre15g00776 156 PANTHER OS01G0745000 PROTEIN 18 154 IPR012876 -
Trre15g00776 156 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00776 Trre-Chr15 5712995 5713465 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00776 - - lja:Lj3g3v2576730.1 248.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05064 5 52031089 52031520 Trre15g00776 15 5712995 5713465 ECH
Trre15g00776 15 5712995 5713465 Trre15g00776 15 5712995 5713465 ECH