Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre15g00761 | ATGAGATCTCATAATTCGATAAGTAAAAGAAGACGAAACAAAACTTTACCAGTCGGGGAACCTTCACAAGGGGGGAGACCAACCGAGAGACTACAAGTTCCCATGGTTGATTTTGCTGAAAATGATGACAATGTCATCGAAATTTCATCAAGTGCTTTTGTTGAGGCTGCAGCAAATGTGAGGAGAATTCGTAGAAGTATGGACTATATCCAACAAATTGATGGTGTTTATATCAATTTGGAAGAAGACACTAGTGAAGTGATTGAAAATGCCACAAAGGCACCTGAATCTCCAAAAGAGCCTAGCATAATATGCCCAATATGCATGGGTCCTTCTGTTGAGGAAACGACAACAAGATGTGGCCATATATTTTGCAAAAACTGCATCAAATCTGCATTAACTGCACGTCGTATATGCCCTGTGTGCGGAGTAAAGGCTACTATGAGGGGCCTAGTTAGGGTGTATCTTCCATCTCTACTTGAAGAATCATCCAGTGATGGTGAGGAAAATTGA | 513 | 0.4094 | MRSHNSISKRRRNKTLPVGEPSQGGRPTERLQVPMVDFAENDDNVIEISSSAFVEAAANVRRIRRSMDYIQQIDGVYINLEEDTSEVIENATKAPESPKEPSIICPICMGPSVEETTTRCGHIFCKNCIKSALTARRICPVCGVKATMRGLVRVYLPSLLEESSSDGEEN | 170 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre15g00761 | 170 | PANTHER | ELFLESS, ISOFORM B | 74 | 157 | - | - | |
Trre15g00761 | 170 | ProSitePatterns | Zinc finger RING-type signature. | 120 | 129 | IPR017907 | - | |
Trre15g00761 | 170 | ProSiteProfiles | Zinc finger RING-type profile. | 105 | 142 | IPR001841 | - | |
Trre15g00761 | 170 | Pfam | Zinc finger, C3HC4 type (RING finger) | 105 | 142 | - | - | |
Trre15g00761 | 170 | SMART | ring_2 | 105 | 142 | IPR001841 | - | |
Trre15g00761 | 170 | SUPERFAMILY | RING/U-box | 104 | 147 | - | - | |
Trre15g00761 | 170 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 77 | 169 | IPR013083 | - | |
Trre15g00761 | 170 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre15g00761 | Trre-Chr15 | 5637167 | 5640844 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre15g00761 | 40 | 158 | C3H Transcription Factor Family | AT3G07200 | 36.029 | 1.14e-23 | 90.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre15g00761 | K22651 | - | tpra:123891564 | 166.007 |