Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00756 ATGACCATGGAACCAAACCCAACATCAGATCACATTCTTGACTGGCTTGAAGGTTCTGTCTCTTTCTTTCCATCATTTTTGGATGATCCATATAACAATGGTTACATCCAAGAGTATCCGTTATGGGATCAGAACCAAGATATAAATAACCAGTATCAAATTGATGTCAATACTAATTCCCCTAATGGCACCAACAGCACCAACAACATTGTTGCTGCTAGTACTACCACTAGCACAACATCACTTGAGCCTAATAGTTCTAACAATATACCGTTTTCTGATTTACCGAAGAAACGCAATGCCGAGGATGAATCAGGTCTCAAAAAACAATCACAAAACCAAAAGAACAAGAGAATCAAGAGCCGTCCGACGAATGAAGCTGATAATGGAGATGCAGCTACTGAAGGGACAGTGGTTAGAAAACCTGGTGGGAACAAGAAAGGTGCAGCTAAGGCCAATGGAAATAACAGTAGCAATGGAAACAAGGATGGTAGGTGGGCTGAGGAGTTGCTCAACCCTTGTGCTGCAGCCATAACTGGTGGAAACCTGAATCGCGTGCAGCATCTCTTATATGTTCTTCATGAGCTAGCCTCAACTACTGGTGATGCCAACCACCGGCTTGCAGCACATGGTCTCCGAGCACTGACACAACATCTATCTTCATCTTCATCTACCACATCAGGGACTATAACTTTTGCATCTACAGAACCGCGATTCTTCCAAAAGTCATTACTGAAGTTCTATGAGGTTAGCCCTTGGTTTTCCTTTCCTAATAACATTGCAAATGCTTCCATCCTTCAAGTCCTAGCTGAAGAGCCGAACAATTCACGTTCTCTTCACATCCTTGACATTGGAGTCTCTCATGGGGTGCAGTGGCCAACTTTTCTAGAGGCCTTGAGCCGTCGACCTGGTGGACCTCCTCCTCTGGTTCGTCTCACTGTGGTTACTGCTTCATCAACTGAAAATGACCAAAATATGGAAACCCCTTTTTCAATAGGTCCATGTGGTGATAACTTCTCTTCTAGACTCCTTGGTTATGCTCAGTCCATAAATGTCAATCTGCAGATAAACAAACTTGATAATCATCCATTGCAGACGTTAAATGCTCAAAGTGTTGACACCTCCCCTGATGAAACTCTTATTGTCTGTGCTCAGTTCAGGTTGCACCACTTGAATCATAACACTCCCGATGAAAGAAGTGAGTTTCTGAAGGTGTTGAGAGATATGGAGCCTAAAGGGGTGATATTGAGTGAGAACAACATGGAGTGTTGCTGCAGTAGTTGTGGTGATTTCGCCACTGGATTCTCTCGAAGAGTGGACTACCTATGGAGGTTTTTAGATTCAACCAGTTCAGCATTCAAAGGTCGTGAGAGTGATGAAAGGAGAATGATGGAAGGAGAGGCTGCAAAAGCATTGACAAACCAACGTGAGATGAACGGAGGGAAAGAAAAATGGTGTGAAAGAATGAAAGAAGCAGGATTTACAGGTGAAGTATTTGGAGAGGATGCAATTGATGGAGGTCGAGCTTTGTTAAGGAAGTATGATAATAATTGGGAAATGAAAGTAGAAGAAGAGAACACTACAACTGTGGGACTATGGTGGAAGGGTCAACCTGTTTCTTTCTGTTCTTTGTGGAAACTGGATAAACAGAGTAGTTCAAGCTCAACATTGACAGCAAGGCTTTAA 1686 0.4294 MTMEPNPTSDHILDWLEGSVSFFPSFLDDPYNNGYIQEYPLWDQNQDINNQYQIDVNTNSPNGTNSTNNIVAASTTTSTTSLEPNSSNNIPFSDLPKKRNAEDESGLKKQSQNQKNKRIKSRPTNEADNGDAATEGTVVRKPGGNKKGAAKANGNNSSNGNKDGRWAEELLNPCAAAITGGNLNRVQHLLYVLHELASTTGDANHRLAAHGLRALTQHLSSSSSTTSGTITFASTEPRFFQKSLLKFYEVSPWFSFPNNIANASILQVLAEEPNNSRSLHILDIGVSHGVQWPTFLEALSRRPGGPPPLVRLTVVTASSTENDQNMETPFSIGPCGDNFSSRLLGYAQSINVNLQINKLDNHPLQTLNAQSVDTSPDETLIVCAQFRLHHLNHNTPDERSEFLKVLRDMEPKGVILSENNMECCCSSCGDFATGFSRRVDYLWRFLDSTSSAFKGRESDERRMMEGEAAKALTNQREMNGGKEKWCERMKEAGFTGEVFGEDAIDGGRALLRKYDNNWEMKVEEENTTTVGLWWKGQPVSFCSLWKLDKQSSSSSTLTARL 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00756 561 Pfam GRAS domain family 168 546 IPR005202 -
Trre15g00756 561 MobiDBLite consensus disorder prediction 96 111 - -
Trre15g00756 561 MobiDBLite consensus disorder prediction 75 164 - -
Trre15g00756 561 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 129 534 IPR005202 -
Trre15g00756 561 MobiDBLite consensus disorder prediction 75 94 - -
Trre15g00756 561 ProSiteProfiles GRAS family profile. 158 546 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00756 Trre-Chr15 5568768 5570453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00756 2 546 GRAS Transcription Factor Family AT3G13840 50.814 4.28e-180 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trre15g00756 GRAS 1.1e-75 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00756 - - mtr:11434050 916.376
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g00756 15 5568768 5570453 Trre15g00756 15 5568768 5570453 ECH
Trre15g00756 15 5568768 5570453 Trre11g04543 11 57550328 57551680 PCT