Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00706 ATGCATGACATTATACAAGAAACCGCTTGGGAGATTGTACGACAAGAATCTGTTGAAGAACCTGGTAGCCGAAGCCGACTATTGGATCCTGATGACATTTATCATGTATTGAAAGATAACAAGGGAAGTGAGGAAATCAGAAGTATGGCCATCCGACTATCTGAAATTAAGGAGCTGCAGTTAAGCCCACAAGTGTTTTCCAAGATGAGAAAATTGAAATTTTTGGATATTTATACTAATGGGTCTCAAAATGAAGGGAGTTTGTCTCTTCCTCAAGGACTTGAATTCTTGCCTAATGAACTGAGATATCTTCGTTGGGAGTATTACCCTTTGGATTCCTTGCCGTCCAAGTTTTCTGCAGAAAACCTTGTTACATTGAACTTGCCTTATAGCCAACTGAAAAAACTTTGGCACGGAGTGAAGGATCTTGTGAATTTGAATACTCTTATACTCCATTCATCCACATTCCTAACAGAGCTACCGGACTTTTCGAAGGCGACTAGTCTTGAAATAGTGGACCTTTATTTCTGTGTAGGGTTGACTAGTGTCCATCCATCTATTTTCTCTCTCAAAAAGCTGAAGAAATTGGATCTGAGTGGATGTGTTTCCCTTACAAGCCTTCAAAGCAATAATACACATTTAAGTTCCCTTAGTTATCTCTCCCTCTACAACTGCACATCATTGAAGGAATTCTCAGTGACCTCAGAGAATATGAAAGAATTGAATCTAGAACTCACAAGTATCAAAGAACTACCCTCATCAATTGGACTTCAAACCAAACTTGAAAACTTACATCTAGGACACACTCACATTGAGAGCTTGCCTAAAAGTATCAAGAAACTTACAAGTCTTAGACATCTAGACTTGCATCATTGCAGGGAGCTTAAAACTCTACCAGAACTTCCTCCATCGCTAGAAACACTAGATGCCAGTGGTTGTGTATCACTAGAGAATGTAGTGTTCCGCTCGACTGCTAGTGAACAACTCGAGGAAAAGAAGAAAAAGGTTAGGTTTTGGAATTGCCTTAAACTAAATGAACCTTCTCTTAAGGCTATTGAGTTGAATGCTCAAATTAACATGATGAACTTCTCACACCAGCATATATCCACATGGGACCGTGATCATGATCATGATCATGACCATGATCGCGTTCAAGGCTCGTACGTGTATCCAGGTAGCAAAATTCCAGAGTGGTTGGAATATAATACAAGTACAGATGATTACATAACTATTGATCTTTCTTCTGCTCCTTATTTCTCTAAGTTAGGATTCATTTTTGGCTTCATCATTCCAACCATCTCATCAGAGGGTTTAACTCTGAAATTCAAAATCAGCGACGGTGATGGTGAAGGTATCAAAGTGTACTTGGACAGACCACTTCATGGAATTGAATCGGATCACGTGTATCTAATGTATGACCCTAGATGTTCTCATTACCTAGCTAGCCGAGTCAATGATCAGTCACAGATTAAAATTCAGGTTACAGCGTCATCAAGAACATCGACATCACAGTATGAGCCAGTGCAGTTAAAAGAGTTTGGGGTTAGCCTAGTAACCCCTTCACAATATGGCAAGTTTAAACAGCAATTTGAAACTGATGATGGTAATGTTGTTCCAAATAATGTTTTCGTGGAAGAGCGATCGAGGTTTCTAGAAATTTAA 1662 0.3923 MHDIIQETAWEIVRQESVEEPGSRSRLLDPDDIYHVLKDNKGSEEIRSMAIRLSEIKELQLSPQVFSKMRKLKFLDIYTNGSQNEGSLSLPQGLEFLPNELRYLRWEYYPLDSLPSKFSAENLVTLNLPYSQLKKLWHGVKDLVNLNTLILHSSTFLTELPDFSKATSLEIVDLYFCVGLTSVHPSIFSLKKLKKLDLSGCVSLTSLQSNNTHLSSLSYLSLYNCTSLKEFSVTSENMKELNLELTSIKELPSSIGLQTKLENLHLGHTHIESLPKSIKKLTSLRHLDLHHCRELKTLPELPPSLETLDASGCVSLENVVFRSTASEQLEEKKKKVRFWNCLKLNEPSLKAIELNAQINMMNFSHQHISTWDRDHDHDHDHDRVQGSYVYPGSKIPEWLEYNTSTDDYITIDLSSAPYFSKLGFIFGFIIPTISSEGLTLKFKISDGDGEGIKVYLDRPLHGIESDHVYLMYDPRCSHYLASRVNDQSQIKIQVTASSRTSTSQYEPVQLKEFGVSLVTPSQYGKFKQQFETDDGNVVPNNVFVEERSRFLEI 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00706 553 SUPERFAMILY L domain-like 51 370 - -
Trre15g00706 553 Pfam Leucine Rich Repeat 122 141 IPR011713 -
Trre15g00706 553 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 232 IPR044974 GO:0006952
Trre15g00706 553 FunFam Disease resistance protein RPS4 43 236 - -
Trre15g00706 553 Pfam Leucine Rich repeats (2 copies) 259 302 IPR025875 -
Trre15g00706 553 Gene3D Ribonuclease Inhibitor 236 367 IPR032675 -
Trre15g00706 553 Gene3D Ribonuclease Inhibitor 34 235 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00706 Trre-Chr15 5254132 5256024 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00706 1 300 WRKY Transcription Factor Family AT4G12020 43.366 1.18e-56 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00706 - - tpra:123883106 980.319