Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00705 ATGATAAATGGATTACCACCTTTGGTTAAGAAAAGGCTTAGCCGCATGAAAGTTCTTATTGTTCTTGACGATGTCAAAGATGCGGAGCAACTAGAAGCTTTGGTTGGAAAAGTTGATTGGTTTGGACCAGGAAGTAGAATCATCATAACTACTAGAGATAAGCAGGTACTTGCTGGAAAAGTCGATGATATATACAAGGTTGAGCCATTGGACTCCGCTGAATCTTTTCAGCTTTTCAATTTGCATGCTTTTAATAAACAAAAACATCTTGAAACTGAGTACGATAAACTATCAAAGAAGATGGTCGATTATTCCGAAGGCGTTCCACTAGTTCTTAAAGCTTTAGCTAACCTTCTTTGTGGAAAAGATAAAGCCATATGGGAAAGCCAAGCAAGGAGCCTTAAAATAGAACAGATTGAAGATGTCCATAATGTTTTTAGATTGATATACAGTAATCTTGATTATTATGAAAAGATTATATTCTTGGATATTGCTTGCTTTTTTGATGGATTGAAGTTGGAACTTGACCTCATAAAACTTCTATTGCAAGATCGTCATTATTCAGTTAACAATAGATTAGACAGGCTAAAAGATAAAGCTCTCGTAACTATTTCTCAACAAAGTATTGTATCAATGCATGACATTATACAAGAAACCGCTTGGGAGATTGTACGACAAGAATCTGTTGAAGAACCTGGTAGCCGAAGCCGACTATTGGATCCTGATGACATTTATCATGTATTGAAAGATAACAAGGGAAGTGAGGAAATCAGAAGTATGGCCATCCGACTATCTGAAATTAAGGAGCTGCAGTTAAGCCCACAAGTGTTTTCCAAGATGAGAAAATTGAAATTTTTGGATATTTATACTAATGGGTCTCAAAATGAAGGGAGTTTGTCTCTTCCTCAAGGACTTGAATTCTTGCCTAATGAACTGAGATATCTTCGTTGGGAGTATTACCCTTTGGATTCCTTGCCGTCCAAGTTTTCTGCAGAAAACCTTGTTACATTGAACTTGCCTTATAGCCAACTGAAAAAACTTTGGCACGGAGTGAAGGATCTTGTGAATTTGAATACTCTTATACTCCATTCATCCACATTCCTAACAGAGCTACCGGACTTTTCGAAGGCGACTAGTCTTGAAATAGTGGACCTTTATTTCTGTGTAGGGTTGACTAGTGTCCATCCATCTATTTTCTCTCTCAAAAAGCTGAAGAAATTGGATCTGAGTGGATGTGTTTCCCTTACAAGCCTTCAAAGCAATAATACACATTTAAGTTCCCTTAGTTATCTCTCCCTCTACAACTGCACATCATTGAAGGAATTCTCAGTGACCTCAGAGAATATGAAAGAATTGAATCTAGAACTCACAAGTATCAAAGAACTACCCTCATCAATTGGACTTCAAACCAAACTTGAAAACTTACATCTAGGACACACTCACATTGAGAGCTTGCCTAAAAGTATCAAGAAACTTACAAGTCTTAGACATCTAGACTTGCATCATTGCAGGGAGCTTAAAACTCTACCAGAACTTCCTCCATCGCTAGAAACACTAGATGCCAGTGGTTGTGTATCACTAGAGAATGTAGTGTTCCGCTCGACTGCTAGTGAACAACTCGAGGAAAAGAAGAAAAAGGTTAGGTTTTGGAATTGCCTTAAACTAAATGAACCTTCTCTTAAGGCTATTGAGTTGAATGCTCAAATTAACATGATGAACTTCTCACACCAGCATATATCCACATGGGACCGTGATCATGATCATGATCATGACCATGATCGCGTTCAAGGCTCGTACGTGTATCCAGGTAGCAAAATTCCAGAGTGGTTGGAATATAATACAAGTACAGATGATTACATAACTATTGATCTTTCTTCTGCTCCTTATTTCTCTAAGTTAGGATTCATTTTTGGCTTCATCATTCCAACCATCTCATCAGAGGGTTTAACTCTGAAATTCAAAATCAGCGACGGTGATGGTGAAGGTATCAAAGTGTACTTGGACAGACCACTTCATGGAATTGAATCGGATCACGTGTATCTAATGTATGACCCTAGATGTTCTCATTACCTAGCTAGCCGAGTCAATGATCAGTCACAGATTAAAATTCAGGTTACAGCGTCATCAAGAACATCGACATCACAGTATGAGCCAGTGCAGTTAAAAGAGTTTGGGGTTAGCCTAGTAACCCCTTCACAATATGGCAAGTTTAAACAGCAATTTGAAACTGATGATGGTAATGTTGTTCCAAATAATGTTTTCGTGGAAGAGCGATCGAGGTTTCTAGAAATTTAA 2295 0.38 MINGLPPLVKKRLSRMKVLIVLDDVKDAEQLEALVGKVDWFGPGSRIIITTRDKQVLAGKVDDIYKVEPLDSAESFQLFNLHAFNKQKHLETEYDKLSKKMVDYSEGVPLVLKALANLLCGKDKAIWESQARSLKIEQIEDVHNVFRLIYSNLDYYEKIIFLDIACFFDGLKLELDLIKLLLQDRHYSVNNRLDRLKDKALVTISQQSIVSMHDIIQETAWEIVRQESVEEPGSRSRLLDPDDIYHVLKDNKGSEEIRSMAIRLSEIKELQLSPQVFSKMRKLKFLDIYTNGSQNEGSLSLPQGLEFLPNELRYLRWEYYPLDSLPSKFSAENLVTLNLPYSQLKKLWHGVKDLVNLNTLILHSSTFLTELPDFSKATSLEIVDLYFCVGLTSVHPSIFSLKKLKKLDLSGCVSLTSLQSNNTHLSSLSYLSLYNCTSLKEFSVTSENMKELNLELTSIKELPSSIGLQTKLENLHLGHTHIESLPKSIKKLTSLRHLDLHHCRELKTLPELPPSLETLDASGCVSLENVVFRSTASEQLEEKKKKVRFWNCLKLNEPSLKAIELNAQINMMNFSHQHISTWDRDHDHDHDHDRVQGSYVYPGSKIPEWLEYNTSTDDYITIDLSSAPYFSKLGFIFGFIIPTISSEGLTLKFKISDGDGEGIKVYLDRPLHGIESDHVYLMYDPRCSHYLASRVNDQSQIKIQVTASSRTSTSQYEPVQLKEFGVSLVTPSQYGKFKQQFETDDGNVVPNNVFVEERSRFLEI 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00705 764 Pfam Leucine Rich Repeat 333 352 IPR011713 -
Trre15g00705 764 Gene3D - 3 63 IPR027417 -
Trre15g00705 764 Pfam Leucine Rich repeats (2 copies) 470 513 IPR025875 -
Trre15g00705 764 Gene3D Ribonuclease Inhibitor 447 578 IPR032675 -
Trre15g00705 764 Gene3D Ribonuclease Inhibitor 218 446 IPR032675 -
Trre15g00705 764 FunFam Disease resistance protein RPS4 254 447 - -
Trre15g00705 764 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 164 IPR027417 -
Trre15g00705 764 SUPERFAMILY "Winged helix" DNA-binding domain 141 249 IPR036390 -
Trre15g00705 764 Pfam NB-ARC domain 11 143 IPR002182 GO:0043531
Trre15g00705 764 SUPERFAMILY L domain-like 262 580 - -
Trre15g00705 764 PRINTS Disease resistance protein signature 105 119 - -
Trre15g00705 764 PRINTS Disease resistance protein signature 12 26 - -
Trre15g00705 764 PRINTS Disease resistance protein signature 399 415 - -
Trre15g00705 764 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 443 IPR044974 GO:0006952
Trre15g00705 764 Gene3D - 70 154 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00705 Trre-Chr15 5253499 5256024 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00705 8 511 WRKY Transcription Factor Family AT4G12020 40.000 9.58e-93 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00705 - - tpra:123883106 1366.29