Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00701 ATGTCTGGATTTGATTCATTAAATTTTTCGGATGATGCTAAGCTTGTCGAAGAAATAGTTCAAAATGTGTTGACAAAGTTGAATCAAGTGGACCAAGGAAAGTCAAAAGGACTTGTAGGAATTGAAAAGCAAATTTCACCTATAGAATCATTGTTGCATTTAGAGTTGGAAGATGTCCGTGTTCTTGGAATTTGGGATGACAAGGGAAGTGAAGCCATCAGAAGTATGGCCATTAGATTATCTGAAATTAAGGAGCTGCAGTTAAGCCCTCAAGTATTTGCCAAGATGAGCAAGTTGAAATTTTTGGATATTTACACTAAGGGGTCTCCAAATGAAGGTAGTTTGTCTCTTCCTCGAGGGCTTGAATTTTTGCCTAATGAACTGAGATATCTTCGTTGGGAGTATTACCCTTTGGAATCCTTGCCATCCAAGTTTTCTACAGAAAACCTTGTTACATTGAGCTTGCCTTATAGCCGATTGAAAAAACTTTGGCATGGAGTGAAAGATCTTGGGAATTTGAATGTCCTGATAGTCCATTCATCCACACTCCTAACAGAGCTACCGGACTTTTCAAAGGCCGCAAGTCTTGAAATACTGGACCTTCATTTCTGTGTAGGGTTGACTAGTGTCCATCCATCTGTTTTCTCTCTCAAAAAGCTAAAGAAACTGGATCTGAGTGGATGTGTTTCCCTTACAAGCCTTCAAAGCAATAATACCCATTTAAGTTCCCTTAGTTATCTCTCCCTCTACAACTGCACATCACTGAAGGAATTTTCAGTGACCTCGAAGAATATGAACGAACTGAATTTAGAACTCACAGGTATCAAAGAACTACCCTCATCAATTGGACTTCAAACCAAACTTGAAAAGTTACATCTCGGACACACTCACATTGAGAGCTTGCCTAGGAGCATCAAGAATCTTACAAAGTTGAAACAACTAGGCTTGCATCATTGCAGAGAGCTTCAAACTCTACCGGAGCTTCCTCTATCGCTAGAAATACTAGCTGCCATTGGTTGTGTATCACTAGAGAATGTAGTGTTTGGTTCAACTGCTAGCGAACAACTTAAGGAAAAGAGGAAAAGGGTTACCTTCTGGAATTGCCTTAAACTAAATGAGCCATCTCTCAAGGCTATTGGGTTGAATGCTCAAATTAACATGATGAGCTTTTCACACAAACATATATCCACATGCGATCGTAATCGTGATCGTCATCATGATCATGATCACGATCTTAATCAACACATGTACGTGTATCCAGGTAGCAAAATTCCAGAGTGGTTGGAATATAGTACAACTACAAATGATTTCATAACTATTGATCTTTCTTCTGCTCCTTATTTCTCTAAGTTGGGTTTTATTTTTGGCTTCATCATTCCAACCATCTCATCAGAGGGTTCAATTCTTAAATTCAAAATCAGTGATTGTGATGGTGAAGATGAAGGTATTAAAGTGTACTTGGACAGACCGCATCACGGAATTGAATCGGATCATGTGTATCTAATGTATGACCCAAGATTGTCTCATTACCTAGCTAGCCGAGTCAATGATTGGTCAATGATTAAAATTCAGGTTAGAGCATCATCAAGAACACCGACATCACAGTACATGCCAGTGCAGTTAAGAGGGTTTGGGGTTAGCCTAGTAACTCCTTCACTATATGACAAGTTTAAACAGCAATTGGAATTTGGTGATGGTATTGTTGTTCCAGATAATACATGTTCGGTGGAAGAAAGATCGATGTTTACAGGAATTTAA 1758 0.3891 MSGFDSLNFSDDAKLVEEIVQNVLTKLNQVDQGKSKGLVGIEKQISPIESLLHLELEDVRVLGIWDDKGSEAIRSMAIRLSEIKELQLSPQVFAKMSKLKFLDIYTKGSPNEGSLSLPRGLEFLPNELRYLRWEYYPLESLPSKFSTENLVTLSLPYSRLKKLWHGVKDLGNLNVLIVHSSTLLTELPDFSKAASLEILDLHFCVGLTSVHPSVFSLKKLKKLDLSGCVSLTSLQSNNTHLSSLSYLSLYNCTSLKEFSVTSKNMNELNLELTGIKELPSSIGLQTKLEKLHLGHTHIESLPRSIKNLTKLKQLGLHHCRELQTLPELPLSLEILAAIGCVSLENVVFGSTASEQLKEKRKRVTFWNCLKLNEPSLKAIGLNAQINMMSFSHKHISTCDRNRDRHHDHDHDLNQHMYVYPGSKIPEWLEYSTTTNDFITIDLSSAPYFSKLGFIFGFIIPTISSEGSILKFKISDCDGEDEGIKVYLDRPHHGIESDHVYLMYDPRLSHYLASRVNDWSMIKIQVRASSRTPTSQYMPVQLRGFGVSLVTPSLYDKFKQQLEFGDGIVVPDNTCSVEERSMFTGI 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00701 585 Gene3D Ribonuclease Inhibitor 264 383 IPR032675 -
Trre15g00701 585 Gene3D Ribonuclease Inhibitor 8 263 IPR032675 -
Trre15g00701 585 SUPERFAMILY L domain-like 74 396 - -
Trre15g00701 585 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 81 260 IPR044974 GO:0006952
Trre15g00701 585 Pfam Leucine Rich Repeat 149 168 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00701 Trre-Chr15 5235930 5239992 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00701 66 335 WRKY Transcription Factor Family AT4G12020 39.427 1.27e-41 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00701 - - tpra:123883104 937.176