Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00697 ATGCATAGCATTATACAAGAAATGGCTTGGGAAATTGTTCGAAAAGAATCCGATGACGACCTTGGAAAGCAAAGTCGACTATTGGATCCTGATGATATTTATCATATACTGAAAAATAACAAGGGGAGTGAGGCTATTAAAAGCTTAGCTACTGACTTGTCAATAATTAAGGAGCTGCAGTTAAATCCAAACGTGTTTGCTAAAATGAACAAACTGCAATACCTGGATATTTATAGTAAAGGCTACTCTTGTGATTTTGTCCAGAGTCGAGGGGGCTGCCGGGTGAGAGAACTTTGGCAAGAAGATAATAAGGATCTTGTGAATTTAAAATATCTTAAACTTGGTTCATCCTCATACCTGGTGGAGCTTCCAGACTTGTCATCTGCTGCAAATCTTGAAGTAATTGATCTTCGTCTCTGTACGGCGTTGATTAGCTTACATCCATCTGTCTTTACCCTCAATAAGCTTGAGAAATTGGACATGGGTGGATGTCTTTCCCTCAGAAGCCTGAAAAGCAACATCCATTTAAGCTCCCTTCGTTATCTCTACCTTGGTGGTTGCACTTCACTAAAGGAGTTCTCGTTAACCTCAAAGGAAATGGTAAAGTTGAATTTAGAACTAACAGGTATCAAACAACTTCCATCATCAATTGGACTTCAAATCAAACTTGAAAAGTTGCTTCTTGGAAACAGTCACATTGAGAACTTTCCCAAAAGCGTCAAACTTCTTACAAGTCTAAGACATCTAGGCTTACAAGATTGTAGGAAGCTTCAAAGTCTACCTGAGCTACCTTCATCATTGATAGCTCTAGATGCCAGTGGCTGTCTATCATTGGAGAATGTAACTTTTCCTTCGACTGCAATTCAAATGTTAAAGGAAAAGAAGACGAGGGTTGCCTTCTGGAATTGCCTGAAACTGAATGAACATTCTCTCAAGGCAATGGAGCTAAATGCACAAATTAACATGATGAAATTTGCACATCAGCATATATCCATGTCTCGTAGTCACCCTTATGATGCTAAAGGCACGTACGTGTACCCGGGAAGCAATGTTCCAAAATGGTTGGTGTATAGAACAACACATGATTACATGACTATTGATCTCTCTTTTGCTAACCATTCCTCTCAATTGGGCTTCATATTTTGCTTCATTGTTCCACCGGTTCCATCACAGGGTTTCATTTTAAGATTTAATATTAGTGTTGATGGTGATGATAGTCAACTGTACTTGGATAGGCCAAGTCATGAAATTAAATCAGATCACGTGTATTTAGTATATGATCGGGGGTTTTCTCGTTATCTCAATGGCCGAATCAAAGATCAGCCAAAGTTCAAAATTAAGATTACAGCAGAATCACGCACACTCACATCAGAGTCCAAGTATTCCAACTTCATTATGGAGTGTTGTTAA 1410 0.3887 MHSIIQEMAWEIVRKESDDDLGKQSRLLDPDDIYHILKNNKGSEAIKSLATDLSIIKELQLNPNVFAKMNKLQYLDIYSKGYSCDFVQSRGGCRVRELWQEDNKDLVNLKYLKLGSSSYLVELPDLSSAANLEVIDLRLCTALISLHPSVFTLNKLEKLDMGGCLSLRSLKSNIHLSSLRYLYLGGCTSLKEFSLTSKEMVKLNLELTGIKQLPSSIGLQIKLEKLLLGNSHIENFPKSVKLLTSLRHLGLQDCRKLQSLPELPSSLIALDASGCLSLENVTFPSTAIQMLKEKKTRVAFWNCLKLNEHSLKAMELNAQINMMKFAHQHISMSRSHPYDAKGTYVYPGSNVPKWLVYRTTHDYMTIDLSFANHSSQLGFIFCFIVPPVPSQGFILRFNISVDGDDSQLYLDRPSHEIKSDHVYLVYDRGFSRYLNGRIKDQPKFKIKITAESRTLTSESKYSNFIMECC 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00697 469 Gene3D Ribonuclease Inhibitor 199 321 IPR032675 -
Trre15g00697 469 SUPERFAMILY L domain-like 1 293 - -
Trre15g00697 469 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 194 IPR044974 GO:0006952
Trre15g00697 469 Gene3D Ribonuclease Inhibitor 34 198 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00697 Trre-Chr15 5222675 5224804 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00697 1 262 WRKY Transcription Factor Family AT4G12020 33.981 5.09e-30 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00697 - - mtr:11419915 610.142