Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00688 ATGTTGACTTGCATAGCTTGTTCTAAGCATCTCAATAATGGATCTCTTCCTCAACAAGAAGAGGATGAAGCTGTGCAAACACCTAGCACCAAACAAGCCATCAAAACCATCACTGCTCAGATCAAGGACATGGCAGTGAAGGCTTCTGGAGCCTATAAGAATTGTAAGCCCTGTTCAGGATCTTCCAATGGTAACAAGAACAAAAAGTATGCTGATTCTGATATGGGATCAGATTCAGCAAGGTTCAACTGGGCGTACCGAAGAACCGGGAGTGCGAGTTCTACACCAAGAATGTGGGGGAAGGAAATGGAAGCTAGACTCAAAGGGATTTCGAGTGGAGAAGGAACACCAACATCAGTGAGTGGACGTACCGAGTCAGTTGTGTTCATGGAAGAAGAGGATGAACCTAAGGAATGGGTTGCACAAGTTGAGCCTGGTGTGCTTATTACTTTTGTTTCATTGCCCCAAGGTGGGAATGATCTAAAGAGGATACGGTTCAGCCGTGAAATGTTTAATAAATGGCAAGCTCAGAGATGGTGGGCAGAGAACTATGACAAGGTTATGGAGTTATACAATGTTCAAAGGTTCAATCAACAAGCAGTTCCTCTCCCAACCCCACCCAGATCTGAAGATGAGAGTTCAAAGATTGAATCTGCAAGGGACAGCCCGGTCACACCTCCTCTCAGCAAAGAGCGTCTGCCTCGTCACATTCACCACCAAATGGGTATGGGCTACTCCTCATCGGATTCACTGGATCACCACCACCATATGCAACCTCAGCCTTTCTATGAAACAAGCCGTCTGGCTTCAAAACCCAATCTTTCTAACATTGGTGTGTCAAAGACCGAAAGATCGTCCATTGATGCTTCTGTAAGGACGAGTTCATCGGGAGATGAAGAAGATCACTCTGGTGAGCTCTCAATCAGCAATGCCAGTGATATGGAAACCGAGTGGGTTGAACAGGATGAACCAGGAGTATATATCACTATCAGAGCACTACCAGGTGGAACCCGAGAACTTAGGCGCGTCCGCTTCAGCCGAGAGAAGTTTGGAGAAATGCATGCGAGATTGTGGTGGGAGGAGAACCGTGCGAGGATACAAGAGCAATACTTGTGA 1116 0.4659 MLTCIACSKHLNNGSLPQQEEDEAVQTPSTKQAIKTITAQIKDMAVKASGAYKNCKPCSGSSNGNKNKKYADSDMGSDSARFNWAYRRTGSASSTPRMWGKEMEARLKGISSGEGTPTSVSGRTESVVFMEEEDEPKEWVAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVQRFNQQAVPLPTPPRSEDESSKIESARDSPVTPPLSKERLPRHIHHQMGMGYSSSDSLDHHHHMQPQPFYETSRLASKPNLSNIGVSKTERSSIDASVRTSSSGDEEDHSGELSISNASDMETEWVEQDEPGVYITIRALPGGTRELRRVRFSREKFGEMHARLWWEENRARIQEQYL 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00688 371 ProSiteProfiles BRX domain profile. 316 371 IPR013591 -
Trre15g00688 371 ProSiteProfiles BRX domain profile. 137 192 IPR013591 -
Trre15g00688 371 MobiDBLite consensus disorder prediction 200 314 - -
Trre15g00688 371 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 371 IPR044532 -
Trre15g00688 371 MobiDBLite consensus disorder prediction 263 293 - -
Trre15g00688 371 Pfam Transcription factor BRX N-terminal domain 22 58 IPR027988 -
Trre15g00688 371 Pfam Transcription factor regulating root and shoot growth via Pin3 137 191 IPR013591 -
Trre15g00688 371 Pfam Transcription factor regulating root and shoot growth via Pin3 315 370 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00688 Trre-Chr15 5114513 5117500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00688 1 371 Major Intrinsic Protein MIP AT1G31880 48.205 8.99e-104 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00688 - - gmx:100805480 655.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g00688 15 5114513 5117500 Trre15g00688 15 5114513 5117500 ECH