Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00668 ATGGCGAATAACGATTCAAAATCTGATCAAAATTCCGAAACCCGATTATACAATCCATACAAAGACCTCGAAGTTCCTATCCGAAATCTCTACCAACTCTCAACCTCTCCAGAGTTTCTCTTTAACGAAGAAGCTATCAAACGCCGTTCATGGGGAGAAAATCTCACCTTCTACACTGGCTGCAGTTACCTCGCCGGTTCAATCGCCGGTGCCGGAGTCGGACTCGTTGACGGTGTTCGATCTTTTGAGTCCGGTGATACCATGAAGCTTCGGGTTAATCGGATTCTTAACTCCTCCGGTCATGCTGGTCGGACATGGGGAAACCGTGCTGGGATCATTGGGTTGCTTTACGCTGGAATTGAGAGTGGGATTGAAGCTGCGAGGGATACTGATGATGCCTGGAATAGTGTTGCAGCGGGGCTTGGGACCGGTGTGCTTTATCGAGCCGCAAGAGGGGTGAGATCGGCTGCGGTAGCTGGTGCTGTTGGCGGTGTTCTTGTTGGAGCTGCCGTGACTGCTAAGCAGGTTATGGGACAGTGA 540 0.5093 MANNDSKSDQNSETRLYNPYKDLEVPIRNLYQLSTSPEFLFNEEAIKRRSWGENLTFYTGCSYLAGSIAGAGVGLVDGVRSFESGDTMKLRVNRILNSSGHAGRTWGNRAGIIGLLYAGIESGIEAARDTDDAWNSVAAGLGTGVLYRAARGVRSAAVAGAVGGVLVGAAVTAKQVMGQ 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00668 179 PANTHER TIM23 26 172 IPR045238 GO:0022857
Trre15g00668 179 Pfam Tim17/Tim22/Tim23/Pmp24 family 57 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00668 Trre-Chr15 4910651 4912412 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00668 3 177 Chloroplast and Mitochondria Gene Families AT1G17530 66.854 1.22e-75 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00668 K17794 - gmx:100813158 258.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g04586 11 57776910 57777476 Trre15g00668 15 4910651 4912412 PCT