Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00644 ATGTCTTATTCTAGCAGGAAGCACGATGTGTTTGTTAGCTTCAGAGGCGAGGACACTCGGTATGGTATCACAGCGCATATTTACGATGCTCTGATTTGTAAATCAATCAAAACATTCATAGATTACGAGCTGAATAGAGGAGAAGATGTTTGGCCAAAACTTTCCGCAGCAATAGAAGACTCACACATCTCCATTGTTGTTTTCTCTGAAAATTTTGCAACCTCAAAATGGTGTTTGGAAGAACTGGTCAAAGTGCTGAAATGCAGAAAAGAGAATGGTCAAGTTGTTATACCTGTTTTCTATAAAACAGATCCGTCACACATCAGAAATCAGACCGGCAGTTTTGAGAAAGCATTCGCAAAACATGAACGAGATCTTGGGACCAATGACAACAAATCTAACAAACTTAAAGTTTGTAACTGGAAAGCTGCCCTCACTGAAGCAGCCAATATATCTGGATGGGACACTCAAACCCACAAGGATGAATCTAACCTGATCCACAAAATTGTGAATGATGTATTGCAAAAGCTACAGCTGAGGTACCCGAATGAACTAGAAGGCTTTGTGAGAAACGAAAAAAACTATGAACTCGTAGAGTCATTAGTGGTAAGAAATCAAATAGTTGGAATTTGGGGTATGGGCGGAATGGGAAAGACAACCATTGCCAAAGCCTTGTTTGCCAAATATTTTGCCCAATATGACCATGTTTGCTTCGCTAGTGCAAAAGATTATTCGCTTAGTAAGCTTCTCTCTGAGCTACTAAAGGAAGAATTTTCCCCATCTGATGTTGCAATATCTACATTTCATATGAGGAGGCTGAGAAGTAGTAAAGTTTTTATTGTAGTTGATAATGTGGACAGTTTAGATCAGTTTGAATATTTATGCAGAGATTACGGTAAGCTACATACGGATAGTAGACTCATTATAACAACAAGAGACAGACATTTGCTGAGTGGAAGAGTTGATTGGATATATGACGTCGAGGAATGGGAAACTTCAAAATGTCTAGAGCTTTTTTGCCTAGAAGCCTTCGTGCCAAGTCATCCACGACAGAATTACGAGCATCTCTTGCAAAGGGCAATCACTTATGCAGGGGGTGTTCCTCTGGCCGTTAAAGTTTTTGCTTTACTTCTTCGTGCAAGAGAAATTGAATTTTGGGAAAGTGCTTTTAAGAAACTGGACAATCATTCTAATGCAGCAATGCATAAAGTTTTAAAATTGAGCTATGATGACTTAGATGAACCACAAAAGAAGGTATTTCTAGACATAGCATTCTTTTTCATAGGAGAAAACAAAGATTGTGTCGCAAGGATACTAAATGCTTGTGATTTCGGAGGAAGCAGTGAAATAGTAATCCTCAAAGACAAGGCTTTGATAACTATCTCAAATGACCATACAATACAAATGCATGACTTGCTGCAAAAAATGGGTTCGGACATAATATGTAATGATTGTGGCACGGACCCTGCAACACATACCCGACTGAAGGGAAGAGCAGCTCTTGAAGTAATTGAAGAAAACAAGGGGAGTAGCTCCATTGAAGGCATAACGTTGGATTTGTCTCAAAATAATAATTTCCCTCTAAGTGCAGACACCTTCAGCAAGATGGAAGGCTTAAGAATTCTTAAATTCTATGCACCCTCTAACCAGAAGTGTACCGATCCATACAAAAACCTTCCCAAATTTATTGAGCCATTTTCAAAAAATAAACTGAGGTATTTTGAGTGGAATGGATACCCTTTTGAGTCTCTTCCAGAACCTTTTTATGCTAAGTTTCTTGTTGAGATCCGCATGCCGCGTAGCAATGTTAAACAACTGTGGCAGGGGATACAGGAACTTGATAAATTGGAGGGAATTGACCTGAGTGAATGCAAGCATTTTGTACTCCTTCCGGATTTGGCTAAGGCATCAACACTTAAATGGATCAATCTCTCTGGTTGTGAGAGTCTGGTTGATCTTCATCCATCTGTTTTATGCACAGATACACTTATTACTTTGATACTGGATAGGTGTACAAAGGTTAGGAAAGTTAGAGGCGAAAAACATTTAAATTTTTTGGAGAAGATCAGTGTGGATGGGTGCTCAAATCTAGAGGAATTTGCTGTGTCCTCAGATTTAATTGAAAACTTGGATTTAAGCAGTACAGGAATCCAAACCCTGGACCTATCAATTGGTCGTCTTCACAAACTTAAACGACTTAATCTAGAAAGTTTAAGACTCAACCATCTTCCAAAGGAGTTATCTAGTGCAAGATCTATTATGGAATTGAAGATTTCTGGCAGCAAACTAATAGTTGATAAACAACAGCTACATGAGCTGTTTGATGGCTTACGATCCCTACAAATACTACATATGAAGGATGTTATAAACCCGTTTGAACTCCCCAACAACATCGACGTTCTATCAAAGTTAATGGAATTAAACCTTGATGGAAGCAACATGAAGAGGTTGCCTGAAAGCATTAAAAAACTTGAAGAACTTGAAATTCTGTCTTTGGTGAATTGCAGGGAGCTTGAGTGCATACCAGAGCTTCCACCTCTCATCACACTGTTAAATGCAGTTAACTGCATGTCACTGGTTTCAGTGTCAAGTCTAAAAAATTTAGCAACAAAGATGATGGGAAAAACCAAACACATTTCATTCAGTAACAGCTTGAATTTGGATGAACATTCACTCAACCTTATAATGGAAAGTCTAAAGCTAACAATGATGAGTGCTGTGTTTCAAAATGTGTCTGTAAGAAGACTTCGTGTGTCCGTTCACAGCTACAACTATAGCAGTGTTGATGCGTGTCAACCAGGAAAAAGTATCCCGAGTCTGTTCCAATGTCAAACAGCTACTGACTCTTCCATTACGATTAAATTGATACCTGATCGTTCCAACCTGCTGGGATTCATATACTCGGTGGTTCTTTCTCCAACAGGAGGAAATGGAGTGAAGAAGGGTGAAGCTAGAATAAAGTGTCAATGCAACTTGGGAGAAGAAGGTATAAAGGCTTCCCAGCCAAATACTTATGTCACAGAGATGAACTCAGATCATGTTTATGTGTGGTATGATCCATTCCATTGTGACAGCATTCTCAGATTTTATAAACCCGAGATTTGTTTTGAGTTCTCTGTTACAAACGATGCGGGGGAAGTTGATGGTTCAATTGGTATTGAAAAGTGCGGGGTACGACTCGTAACTGTTGAAGATTTGGAGAGTGTTTTACCGGAATTGGAATTGGATTTGGAAAAGAAAAAGGAGTTAAAGATGGCAGTGATATTTGAATCAGGCTTTTCCCAAGTTAAAATAGAATCAGTTGAAGATGAAAATGAGAATGAAAGCCACTTCAATAATGAGGAAGGGAACATCGTATCTTCTAACAAGGAAACCTATACCAATGCTGGATCCAGTCATGAGGAGAATGTTACAAACCCTACTTTACATCCTGTTTTCAAGGAAGATAAAGATAGTTGTTGTGGTTGCTTTCCTTGCAATTTTAATTTCAGAGTACTATTTCAGGAAACTAAGAATCTTCAACAATCACCACCACCATTAGTGAAGAATCTAGAGATTCCATCTCATTCTTATACTAACACCCTAATGACTGCTGAGACTTCTTCAAGTAAACCCTCTTCTTCTTCTTCTTCTTCAAAGGATCATGAATATTCTCCTATTGATTATTCTGAATATAAGAGAATCCTTGAAGAAGAAGACCCTTTAACAATCATGGAGAAACTCTTATCTGGTGATAAACTTTGTTGTGCTTCTCAATCTACTGAAACGCAGAGTGCGTCAATTGAGATGTTGCTTGATGAATTAAAACAATTGGCATTTTCAAGGAACTTATTGAAAAATTTACCCAATGATGTGACCCTTGGAGAAGAGGTGAAAACTTTATTAGCTAAACTCGATGATAGAGCTAATGAGCTTTCTGAGAAACAAAGTTCTGGTATTGCTGATTTCACCACAATCTTTAAAGAAGCCATAATGAATATTGATGAAGGAAAACTCAGCAATCTTACTCTTCAACAACTTAATGTGGATCATAAAGATTCAATATCCAAGCTTCAAGCATCCAAAAACAAGATAATGAAGTTTGATGAGTCCATCATTGCTGGTGAGAATAAGATTAAGGCCATGGTTGTTGAAATTGAAGATATTAAAGCACATATTCGATTGCTCAAGGAAAAAACAAGTAAGGTTCAACAAGCGAAGTCGCAGTTAGAGGAAGCTTGCTCGAAATGTAAAGAGAAGAGAAGTGAAACTGTAGAAGTAGTTAAAAATGTAGCCTCTAAGACCATAGAAACCCGCGTGAAGATCGATAATGTCAAAAAGAAGAAGCTGGAGTTGGATTCAAAGTATGAGGCACTTGAAGGACATTATTCCATAATGAGACTGTCGCCTCCTTTTTAG 4398 0.3815 MSYSSRKHDVFVSFRGEDTRYGITAHIYDALICKSIKTFIDYELNRGEDVWPKLSAAIEDSHISIVVFSENFATSKWCLEELVKVLKCRKENGQVVIPVFYKTDPSHIRNQTGSFEKAFAKHERDLGTNDNKSNKLKVCNWKAALTEAANISGWDTQTHKDESNLIHKIVNDVLQKLQLRYPNELEGFVRNEKNYELVESLVVRNQIVGIWGMGGMGKTTIAKALFAKYFAQYDHVCFASAKDYSLSKLLSELLKEEFSPSDVAISTFHMRRLRSSKVFIVVDNVDSLDQFEYLCRDYGKLHTDSRLIITTRDRHLLSGRVDWIYDVEEWETSKCLELFCLEAFVPSHPRQNYEHLLQRAITYAGGVPLAVKVFALLLRAREIEFWESAFKKLDNHSNAAMHKVLKLSYDDLDEPQKKVFLDIAFFFIGENKDCVARILNACDFGGSSEIVILKDKALITISNDHTIQMHDLLQKMGSDIICNDCGTDPATHTRLKGRAALEVIEENKGSSSIEGITLDLSQNNNFPLSADTFSKMEGLRILKFYAPSNQKCTDPYKNLPKFIEPFSKNKLRYFEWNGYPFESLPEPFYAKFLVEIRMPRSNVKQLWQGIQELDKLEGIDLSECKHFVLLPDLAKASTLKWINLSGCESLVDLHPSVLCTDTLITLILDRCTKVRKVRGEKHLNFLEKISVDGCSNLEEFAVSSDLIENLDLSSTGIQTLDLSIGRLHKLKRLNLESLRLNHLPKELSSARSIMELKISGSKLIVDKQQLHELFDGLRSLQILHMKDVINPFELPNNIDVLSKLMELNLDGSNMKRLPESIKKLEELEILSLVNCRELECIPELPPLITLLNAVNCMSLVSVSSLKNLATKMMGKTKHISFSNSLNLDEHSLNLIMESLKLTMMSAVFQNVSVRRLRVSVHSYNYSSVDACQPGKSIPSLFQCQTATDSSITIKLIPDRSNLLGFIYSVVLSPTGGNGVKKGEARIKCQCNLGEEGIKASQPNTYVTEMNSDHVYVWYDPFHCDSILRFYKPEICFEFSVTNDAGEVDGSIGIEKCGVRLVTVEDLESVLPELELDLEKKKELKMAVIFESGFSQVKIESVEDENENESHFNNEEGNIVSSNKETYTNAGSSHEENVTNPTLHPVFKEDKDSCCGCFPCNFNFRVLFQETKNLQQSPPPLVKNLEIPSHSYTNTLMTAETSSSKPSSSSSSSKDHEYSPIDYSEYKRILEEEDPLTIMEKLLSGDKLCCASQSTETQSASIEMLLDELKQLAFSRNLLKNLPNDVTLGEEVKTLLAKLDDRANELSEKQSSGIADFTTIFKEAIMNIDEGKLSNLTLQQLNVDHKDSISKLQASKNKIMKFDESIIAGENKIKAMVVEIEDIKAHIRLLKEKTSKVQQAKSQLEEACSKCKEKRSETVEVVKNVASKTIETRVKIDNVKKKKLELDSKYEALEGHYSIMRLSPPF 1465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00644 1465 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 423 IPR027417 -
Trre15g00644 1465 Gene3D - 2 176 IPR035897 -
Trre15g00644 1465 MobiDBLite consensus disorder prediction 1197 1217 - -
Trre15g00644 1465 Coils Coil 1288 1308 - -
Trre15g00644 1465 ProSiteProfiles TIR domain profile. 6 177 IPR000157 GO:0007165
Trre15g00644 1465 SMART till_3 7 151 IPR000157 GO:0007165
Trre15g00644 1465 Pfam NB-ARC domain 198 412 IPR002182 GO:0043531
Trre15g00644 1465 SUPERFAMILY L domain-like 518 864 - -
Trre15g00644 1465 Coils Coil 1063 1083 - -
Trre15g00644 1465 Pfam TIR domain 7 183 IPR000157 GO:0007165
Trre15g00644 1465 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 746 IPR044974 GO:0006952
Trre15g00644 1465 PRINTS Disease resistance protein signature 207 222 - -
Trre15g00644 1465 PRINTS Disease resistance protein signature 611 627 - -
Trre15g00644 1465 PRINTS Disease resistance protein signature 272 286 - -
Trre15g00644 1465 PRINTS Disease resistance protein signature 364 378 - -
Trre15g00644 1465 SUPERFAMILY "Winged helix" DNA-binding domain 402 483 IPR036390 -
Trre15g00644 1465 Gene3D Ribonuclease Inhibitor 506 705 IPR032675 -
Trre15g00644 1465 Gene3D Ribonuclease Inhibitor 706 904 IPR032675 -
Trre15g00644 1465 MobiDBLite consensus disorder prediction 1197 1216 - -
Trre15g00644 1465 Gene3D - 331 413 IPR042197 -
Trre15g00644 1465 Coils Coil 1382 1416 - -
Trre15g00644 1465 Coils Coil 1435 1455 - -
Trre15g00644 1465 Pfam Leucine Rich Repeat 592 611 IPR011713 -
Trre15g00644 1465 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 154 IPR035897 -
Trre15g00644 1465 Gene3D - 177 321 IPR027417 -
Trre15g00644 1465 FunFam Disease resistance protein (TIR-NBS-LRR class) 4 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00644 Trre-Chr15 4711249 4717062 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00644 208 1076 WRKY Transcription Factor Family AT5G45050 27.553 5.91e-70 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00644 - - mtr:11418910 1769.98