Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00640 ATGCACAACTCTCAAAAAAAGTACGATGTATTCATAAGCTTTAGGGGAGAGGACACACGTACAAACTTCACTGCCCAGCTTCATCAAGCTCTTACCAATAGAAACATTGAATCATACATTGATTATAATCTTGTTAAGGGACATGAGGTTGGACCCGCTCTTGCAAAAGCTATCGAGGACTCGCATATGTCTCTTGTAGTTTTTTCTGAAAACTATGCAACTTCAAAGTGGTGCTTGGATGAACTCCTCCACATACTCAAATGTAGAGAACTTCATGGACAAGTAGTTATACCCGTGTTCTGTAACATAGATCCATCACATGTACGGAAGCAGACTGGGAGTTATGAGATGGCATTTGCAAGATATGAGAGAGACCTCGCCAAATCTCATGTAAATAAAGTGTCCGAGTGGAAAGATGCTCTCACTCAGGCTGCCAATATATCTGGATGGGATTCTCGCAAATATAGGGATGATTCTCAAGTCATCGGCAATATTGTGGAAGATGTTTTGCAGAAGTTATCCCTAATGTTTCCTAATGAACTAAAAGACCTTGTTAAAGTTGATGAAAACAGTGAACATATTGAATTATTAGTGAAAACAATACCAAGGATTGGAATTTGGGGCATGAGCGGAATAGGAAAGACAACCATAGCCATACAGATGTTTGCTAAGAACTTTGCCCATTATGACAATGTATGCTTCTTGGAAAAGGTAAGTGAAGAATCAGAAAAGTTTGGACAAACATATGTTCGTGATAAGCTTCTTAGTAAGCTACTGAAGCGAGAAATTACTGCATCTGATGTTCATGGACAACACACATTCATCAAGAGGAGGCTTAGTGGTAAAAAAAGTTTCATTGTACTGGATGATGTTGATAATGCTACACAATTAGATGATTTATGTGGAGTGCTTAATGACCTTGGACCTAAAAGTAGACTCATTATCACAACAAGAGACAGACATACACTTAGTGGAAAAGTTGATGAAATTTATGAGGTCACAACATGGAAGCTTAAAGACTCTCTAAAGCTTTTTAGCTTAGGAGCATTCAAGCAAATCCATCCTAGAAAGGGTTACGAGCGTATCTCGGAAAGGGCAGTTGAATATGCAGGAGGTGTTCCATTAGCTTTAAAAGTCTTGGGTTCACATTTTCATTCCAAAACACCAAAATTCTGGGAATCTGAGTTGAATGATTATGAGAACAAGGGTGAAGCCTTCCAAAAAATTCAAAAAGTGCTAAGAGCAAGTTATAATGGGTTATCATGGCGACAGAAGGAAATGTTTCTAGACATTGCATTCTTTTTCAAAGGTGAAAACAAAGACTTCGTCACAAGAATATTAGACGCCTTTGGTTTCAATGCAACTAGTGGGATAGAAATCCTCGAAGATAAAGCTCTTATAACTATTTCAAACAACAGTAGAATACAAATGCACGACTTATTACAAAAGATGGCCTTTGATATAGTTCAAGAAGATTATAATGACCGAGGAAAGCGTAGCCGACTGAGGGATGCTAAAGACATTTGTGATGTACTTGGAAATAACAAGGGGAGTGATGCAATTGAAGGAATCATATTTGATTTGTCTCAAAAAATAGATTTACATGTTCAAGCTGACACATTCCACTTAATGACTAAATTAAGATTTCTTAAATTCCACATCCCCAAGGGTAAGAAGAAATTGGGCAACGTGCATATTCCTGAAAATAGTATGCCATTTTTTGACAAATTGATGTACCTTGAGTGGAATGGTTATCCCTTAAAGTCGCTCCCACAACCTTTTCGTGCTGAGCAGCTGATTAAGATTTGTTTGCCGCACAGCAACATTGAACATCTTTGGTACGGAATGCAGGAACTTGTGAATTTAGAGGCAATCGACCTAAGTGAGTGCAAACAGTTGATCAACCTCCCTGATTTGTCCGGGGCATTAAAACTCAAACAGCTGCGCCTTTCTGGTTGTGAAAATTTATGTGAAGTTCAGTCTTCTGCTTTTTCTAAGGACACACTTCATACTTTGCTATTGGATAGGTGCACAAAATTGCAAAGTCTGATGGGTGAGAAGCATTTAACATCTCTAGCGAACTTCAGTGTCAAAGGCTGCTCAAATCTGAAGGAATTTTCGCTGTCCTCAGATTCATTAATAAGGTTGGATTTAAGCAATACAGGAATCAAAATTTTGCACTCATCAATTGGTGGCATGAAAAAGCTTAGTTGGTTGAATCTAGAAGGTTTAAATCTAACAAATTTACCAAATGAATTGTCTCGCTTGAGATCTCTTACTGAACTTCGGGTTTCTAAGTGCAGTGTTGTAACTAAATCAAAGTTAGAAGTTCTTTTTGCTGGTCTGGGATCATTAGCATTATTACACTTGAAAGACTGTTTTAATTTGCTTGAACTCCCTGCAAACATTAGTTCCTTATCATCATTGGAAGAATTAAGACTAGATGGAAGCAATGTGAAGGAGTTGCCTGCTAGCATCAAGGACCTCTCAAAGCTAGAAGTTCAGTCTTTAGACAATTGCATTAATCTTTCTTTTCTGCCTGAACTTCCTTCAAGCATCAAAGAGTTTCAGGCCGACAACTGCACCTCGTTGGTGACAGTATCCACTTTGAAGACTTTTTCAATTATCATGATTGGAAGGAAAAAATGCATTTCATTTAAGAATAGCATTAAGCTGGTATTGGATGGACCCTCCCTTGACTGCATTACGGAAGATGCCATGTTAACAATGAAAAGTGCTGCCTTTCACAATGTATTAGTGAGAAAGTACAGATTCCAAACCCACAGTTTCAATTATAACAGTGCCGAGGTTTGTTTGCCAGGACGCAGAGTTCCAAGACAGTTCAAACACCAATCAGCATATGCCTCCATAACTATCAATATTTCCAACCCGGTGGGCTTCATTTTTGCAGTCGTTGTTTCTCCATACATCAGTCAACGGCCTGGATACTCTGTTGAAATCCAATGTCAATGTTATTCAGAAAATGGAAGGAGGATGGTGGGATATAAGTCTAGGTGGAATCATAAACTGATTACGAATTTGAAAATGGATCATGTTTTTATGTGGTATGATCCATACCATTCTGACAGCATACTCAGAAGTATTGAAAAAAATATTTCTTTTGAATTTTGCATTTCAACTCATACAAGTAGAGGGAGAGAACTTGGTGGCCTTTTATTTATCAGAGAGTGTGGGGTTTGTCCAATCTACTACTCAGAAAGTCAGACGGTTTTAGGCACAGGGAATTTAGACAAGAACTTAGAATTAGAGCTGTATGAGGAAATTCAATTTGAGTCAAGATCAGGTGAAGGCTATGATGAACAGAAAAGCACTGTCATACAGAACCAACAATCGGACTTGACTGAAAATATTCGCAGCTCATATGAATGTTTAATTGTATCTAATGATACTCAGGTAAATGAGAATCCTCTAGGGAAAGGAAATCTGGATGATGATGACAATTCAAAAGAAATGATGAAATCTAAGATTCTTCATGAGAGTTGTGTTGAGTCTGGAGAGGAAACTGGAACTTCTTCCCACAAACAAGAACAATTCAAGAAGGTGTATAACTACTGGAGGTGTGTTGAGTCTGATGTAGAATCGTCTTTCAATAAAGCAGCAACTAAGCTAAAAAGCAAAGACAATGAAGAAACTCAAACTGAATCTGATGCTGGATTGCATCTACTACCTGTAGTGTCAGCAGTTGTTGAAGTAAATTTTGATGAGACCAAGATTTCAGAAGAAACACCAAATATACAAGGAGGACAAATCATTGTTCCTGACACCAATGATCCGATAAGTGAACCAGAACAAGAAAAGGAAAATGCACCAATAATGAATGTTAGCAAGCCTGAAGGCGATCAAGAAGATGGATCGGATGAGGACCCTTTTGCTGAACTTGATAGCATCCTGTTGGGAAGTCCAGAGACTTCACCAAAAGCAACCAGCTGTTCCACAAGCAATGTTGCTATAAGTGAAGCTTTGGATAACCTTGAGTGCCTGTTGGAAAACTCACTCGAGTCCATTATCTGTGACGATGAACTGCAACAACAATTACACGTGTCTTTGGAATGCATAAAGCAAGCAACCCATGAAAAAGTTTCTCCTAATGTTATGAAGCTTGTCCAGAAAATGACATCGTCTATTGAGAACCTTTTCAAAGACTTTGTCATGACTAAAAGTGTGGTTGAGGATCACATTAAAGCTTTGCAACAAAAAGAAAATCTTATGCAGCGATATAGAAATGCTAAGAAACAGAAGGAATCAAAACAGAAAGAGAAGAGTCAGTTTGAGAATGAAGCCAAGCGTCTCGAGGAAGAGGGTGAAAAAGTGGATGAAAAAATTAGAATTCTTGTTGAGCAAAAGAAAAGTATTGAGTTGGAAAAAACCAAGTTGAAGGAGAGCATGGAAAGATGTGAAGGTGAAAAGAAGAATGTGGAAGATGAGGCTAAGAATATGATAACTGAAAGCAAAGAGCTGATGTCAAATATCAAGAATTCTAAATCTTCCTATGCTGCCGCCTTGTCAAAACAGCAGAAGTTAAAAGACAAATGGGAAAGTTTTAGAATAGATTTTGCAGACAACAATGGAAGTAGTAGTAGTAGTAGCTAG 4611 0.3806 MHNSQKKYDVFISFRGEDTRTNFTAQLHQALTNRNIESYIDYNLVKGHEVGPALAKAIEDSHMSLVVFSENYATSKWCLDELLHILKCRELHGQVVIPVFCNIDPSHVRKQTGSYEMAFARYERDLAKSHVNKVSEWKDALTQAANISGWDSRKYRDDSQVIGNIVEDVLQKLSLMFPNELKDLVKVDENSEHIELLVKTIPRIGIWGMSGIGKTTIAIQMFAKNFAHYDNVCFLEKVSEESEKFGQTYVRDKLLSKLLKREITASDVHGQHTFIKRRLSGKKSFIVLDDVDNATQLDDLCGVLNDLGPKSRLIITTRDRHTLSGKVDEIYEVTTWKLKDSLKLFSLGAFKQIHPRKGYERISERAVEYAGGVPLALKVLGSHFHSKTPKFWESELNDYENKGEAFQKIQKVLRASYNGLSWRQKEMFLDIAFFFKGENKDFVTRILDAFGFNATSGIEILEDKALITISNNSRIQMHDLLQKMAFDIVQEDYNDRGKRSRLRDAKDICDVLGNNKGSDAIEGIIFDLSQKIDLHVQADTFHLMTKLRFLKFHIPKGKKKLGNVHIPENSMPFFDKLMYLEWNGYPLKSLPQPFRAEQLIKICLPHSNIEHLWYGMQELVNLEAIDLSECKQLINLPDLSGALKLKQLRLSGCENLCEVQSSAFSKDTLHTLLLDRCTKLQSLMGEKHLTSLANFSVKGCSNLKEFSLSSDSLIRLDLSNTGIKILHSSIGGMKKLSWLNLEGLNLTNLPNELSRLRSLTELRVSKCSVVTKSKLEVLFAGLGSLALLHLKDCFNLLELPANISSLSSLEELRLDGSNVKELPASIKDLSKLEVQSLDNCINLSFLPELPSSIKEFQADNCTSLVTVSTLKTFSIIMIGRKKCISFKNSIKLVLDGPSLDCITEDAMLTMKSAAFHNVLVRKYRFQTHSFNYNSAEVCLPGRRVPRQFKHQSAYASITINISNPVGFIFAVVVSPYISQRPGYSVEIQCQCYSENGRRMVGYKSRWNHKLITNLKMDHVFMWYDPYHSDSILRSIEKNISFEFCISTHTSRGRELGGLLFIRECGVCPIYYSESQTVLGTGNLDKNLELELYEEIQFESRSGEGYDEQKSTVIQNQQSDLTENIRSSYECLIVSNDTQVNENPLGKGNLDDDDNSKEMMKSKILHESCVESGEETGTSSHKQEQFKKVYNYWRCVESDVESSFNKAATKLKSKDNEETQTESDAGLHLLPVVSAVVEVNFDETKISEETPNIQGGQIIVPDTNDPISEPEQEKENAPIMNVSKPEGDQEDGSDEDPFAELDSILLGSPETSPKATSCSTSNVAISEALDNLECLLENSLESIICDDELQQQLHVSLECIKQATHEKVSPNVMKLVQKMTSSIENLFKDFVMTKSVVEDHIKALQQKENLMQRYRNAKKQKESKQKEKSQFENEAKRLEEEGEKVDEKIRILVEQKKSIELEKTKLKESMERCEGEKKNVEDEAKNMITESKELMSNIKNSKSSYAAALSKQQKLKDKWESFRIDFADNNGSSSSSS 1536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00640 1536 SMART till_3 7 147 IPR000157 GO:0007165
Trre15g00640 1536 PRINTS Disease resistance protein signature 617 633 - -
Trre15g00640 1536 PRINTS Disease resistance protein signature 203 218 - -
Trre15g00640 1536 PRINTS Disease resistance protein signature 278 292 - -
Trre15g00640 1536 PRINTS Disease resistance protein signature 370 384 - -
Trre15g00640 1536 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 707 IPR044974 GO:0006952
Trre15g00640 1536 FunFam Disease resistance protein (TIR-NBS-LRR class) 4 175 - -
Trre15g00640 1536 SUPERFAMILY "Winged helix" DNA-binding domain 408 512 IPR036390 -
Trre15g00640 1536 Gene3D - 337 421 IPR042197 -
Trre15g00640 1536 MobiDBLite consensus disorder prediction 1414 1438 - -
Trre15g00640 1536 MobiDBLite consensus disorder prediction 1251 1296 - -
Trre15g00640 1536 Gene3D Ribonuclease Inhibitor 711 889 IPR032675 -
Trre15g00640 1536 Gene3D Ribonuclease Inhibitor 525 710 IPR032675 -
Trre15g00640 1536 Pfam NB-ARC domain 204 405 IPR002182 GO:0043531
Trre15g00640 1536 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 431 IPR027417 -
Trre15g00640 1536 Coils Coil 1396 1496 - -
Trre15g00640 1536 SUPERFAMILY L domain-like 526 868 - -
Trre15g00640 1536 ProSiteProfiles TIR domain profile. 6 173 IPR000157 GO:0007165
Trre15g00640 1536 Pfam TIR domain 7 181 IPR000157 GO:0007165
Trre15g00640 1536 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 150 IPR035897 -
Trre15g00640 1536 Gene3D - 174 330 IPR027417 -
Trre15g00640 1536 Gene3D - 4 173 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00640 Trre-Chr15 4690645 4697075 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00640 3 812 WRKY Transcription Factor Family AT4G12020 30.723 3.62e-87 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00640 - - cam:101489032 1941.78