Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00637 ATGGCTTTCGATATAGTTCGTAATGACCAAGGATTAAAGCATAGCCGATTGAGGAGTATTGAACAATTTCGTTCTGTACTTAAAAATAACAAGGGGGCTGATGTTGAAGGCATACAATTTGATTTGTCTCAAAAAGAAAAATTATGTGACATAGCTGACACGTTCAACATGATGGTTAATCTAAGATTTCTTAGATTATATGTCCCTAAGGGTGAAAAGAGATTGACTACCTTGTCTCATTCTGATCAAGACATTATAAGATTTCCTGATAAACTTACATACCTTGAGTGGAACGGATACCCTCTGAAGTCTATTCCAGATCCTTTTTGTGCTAAGCATCTTGTTGAGATTCGCTTGCCACATAGCAATGTAGAATATCTCTGGCACGGGATGCAGGAACTTGCGAATTTAGAGGCAATTGTCCTAAGTAACTGCAAACATTTGATCAAACTTCCTGATTTGTCTCGGGCATCAAAACTCAGATCGTTGTACCTTTCAGGCTGCAAAAGTTTGTGTGAAATTCAACCCTCCATTTTTTCTAAGGACACACTTGTTACTTTACTACTTGATAGGTGTACAAAACTAGAAAGTCTCAAGAGTAAGAAACATTTAAGATCTCTGCAGAAGATCAATGTCTTCGGGTGCTCAAGCCTTAAGGAATTTTCATTATCCTCAGATTCAATGGAGAGTTTGGATTTAAGCAATACAGGGGTTGAAATATTGCACTCATCAATAAGTGGTATGAGCAAGCTTGGGTTGCTCAATTTAGAAGGTTTAAAACTCTCGAATCTACCAATTGAGTTGTCTTGTCTGGAATTACTTACGGAGCTTCGACTTTCTTACTGTGATATAGTAACCAAATTGAAGTTAAAAGGCATATTTGATGGCTTGGGATCATTGAGAATACTATATTTGAAACATTGTGGCAACTTGCTTGAACTCCCTACAAACATCGGTTCTTTATCATCATTGTATGAGATAAGACTAGATGGAAGTAGTTTGGAGATGCTACCTTCAAGCATGAAGTTTCTCTCTCAGTTAGAGATTTTATGCTTAAACAATTGCATAAAGCTTCATTCTCTCCCAGAGCTTCCTCTAGAAATCAAGGAGATTCATGCCGAAAACTGCACTTCGTTGGTCACTGTCTCCAGCTACAATTACAACAGTGCAGTGGTTTGTTTACCAGAAAGCAAAGTTCCAAGGCAGTTCAAATTCATAACATCAGATTCCAAAATAACTATTAGATCTCCTGACATAAATTCCTCAATTGGATTCATTTTCTCAGTTGTTATTTCTCCATCCACTAGAATGAAAAATAAGCGAGGTAGTGGTGCTAAAATTCAATGTAAATGCTATGGTGAAGATGGCAATAGGGTGGGATTAGTGTCTGAGTGGTATAGTGAACCTATTACGAATTTAAACATGGATCATGTTTTTGTGTGGTATGATCCATACCATTCGGACAGCATACTCGACAAAGATAGAAAAATTCTTTCCTTTGAATTCAACCTTACAACTGATAATGATGGCTTTTTCAGCATGAAACAGTGTGGTATTTGCCCAGTTTTGTCATCAGAAGAGAGGGAAAGATGCGATGAAGAGGAAAGCACCAATGAAATTATCCAAATACAGAACCAAAAGTTTTCTTATGACTCCTTAATCGGTCTATTGAGGTACATGTGGAGGTTGATCATCACCTAG 1701 0.3733 MAFDIVRNDQGLKHSRLRSIEQFRSVLKNNKGADVEGIQFDLSQKEKLCDIADTFNMMVNLRFLRLYVPKGEKRLTTLSHSDQDIIRFPDKLTYLEWNGYPLKSIPDPFCAKHLVEIRLPHSNVEYLWHGMQELANLEAIVLSNCKHLIKLPDLSRASKLRSLYLSGCKSLCEIQPSIFSKDTLVTLLLDRCTKLESLKSKKHLRSLQKINVFGCSSLKEFSLSSDSMESLDLSNTGVEILHSSISGMSKLGLLNLEGLKLSNLPIELSCLELLTELRLSYCDIVTKLKLKGIFDGLGSLRILYLKHCGNLLELPTNIGSLSSLYEIRLDGSSLEMLPSSMKFLSQLEILCLNNCIKLHSLPELPLEIKEIHAENCTSLVTVSSYNYNSAVVCLPESKVPRQFKFITSDSKITIRSPDINSSIGFIFSVVISPSTRMKNKRGSGAKIQCKCYGEDGNRVGLVSEWYSEPITNLNMDHVFVWYDPYHSDSILDKDRKILSFEFNLTTDNDGFFSMKQCGICPVLSSEERERCDEEESTNEIIQIQNQKFSYDSLIGLLRYMWRLIIT 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00637 566 Gene3D Ribonuclease Inhibitor 227 404 IPR032675 -
Trre15g00637 566 Gene3D Ribonuclease Inhibitor 6 226 IPR032675 -
Trre15g00637 566 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 240 378 IPR044974 GO:0006952
Trre15g00637 566 SUPERFAMILY L domain-like 41 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00637 Trre-Chr15 4658840 4661021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00637 4 350 WRKY Transcription Factor Family AT4G12020 32.976 1.49e-30 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00637 - - cam:101488696 531.176