Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00632 ATGGGTGGTTCAGGAAGCTGGTTTAAATCACTTATTCCACCAAAAAAGCCCTCCACCAATAATCAAGTGAAGGGTATTGATAAGAGTAAGAGAAAATGGAAGTTGTGGAGAAATTCTTCAGAAAGTATTGGATTTGGAACCTCTACGAAGAAAGGACATGGTTTTGTTGCTTATGATAAATATTCTTGTTCTTCGTTTGTGGTGAATGAACAAGCTTTTGCTGCTGCAATGGCTGCTGTAGTAAGAACTCCACACAAAGACTTCTTGGTGATTAAGCAGGAATGGTCTGCCATCCGTATCCAGTCTGCTTTTCGAGGCTTCTTGGCAAGACGAGCTTTGAGGGCTCTGAGGGCATTGGTGAGGCTGCAAGCTATATTTCGCGGCCGGTTAGTAAGGAAACAAGCTGCTGTTACTCTACGGTGCATGCAGGCTCTCGTACGAGTTCAAGAACGCGTCAAGGCAAAGAATGTTAGGAATTCTCCAGAAAGGAAAGCTAAGCAGAAGCTACTAAATGAGCAGCACAATCAAGATGATTCTGTTAAACAAGCTGAGAAAGGATGGTGTGACATACCAGGAACTGTGGAAGAGGTTAAAGCAAAACTTAAAATGAGGCAAGAAGGAGCAATTAGGCGAGATAGAACAATGTCATACTCCATTTCCACTCAGACATCAACGGTGAGTTCTAGTCCAACCTCAAGAGCTTCTAAGTCATCGACTCCTCTCAAGAACCGAAGCTTAGACGGTAAGATCTTGTTAGAACGCTGGATTGCGGCTAAGCCATGGGAGAGCAGATTGATGGGAGACATTTACTTGGACTCACCTAACATGACTCCGTTGTCCAAGAAGAATGAGAATGTTGAACTTTCCTTTAACTCATATGGCTTAAAATCTAGAAGGAATGGTGCAACAATTAGAAGTTCATCTAAATCTCTTACAACAAGCCAATCAACTCCGTCGTCTTCAGCTGTAAGCTCTGAATGTATGTATGATGATAGCCCTTTATCAACTTCATGCACATCAGAATCACCAGCCAAGGTGGAAGATACAAAGGAAAGGAAGATTGGGAAACCGAGCTACACAAGTTTGACGGCGTCAACCAAAGCTAAACTGAAAGCGAATAGACATTCGTCTCCGAATTTGAAGAGACTCTTTATGGATGATGATTATCTATCTCATAGCACGAGAACAAACATTCTAAGCGCAGATACTAGAAGCATATCTGGTTCATATTCTTCGGCTAATATATGGAAGGATCTTTATGCAACGCCTTTAAGGACAAGTTATCAAAAGCGATTTACATTGGGAGATAAGTAG 1314 0.4193 MGGSGSWFKSLIPPKKPSTNNQVKGIDKSKRKWKLWRNSSESIGFGTSTKKGHGFVAYDKYSCSSFVVNEQAFAAAMAAVVRTPHKDFLVIKQEWSAIRIQSAFRGFLARRALRALRALVRLQAIFRGRLVRKQAAVTLRCMQALVRVQERVKAKNVRNSPERKAKQKLLNEQHNQDDSVKQAEKGWCDIPGTVEEVKAKLKMRQEGAIRRDRTMSYSISTQTSTVSSSPTSRASKSSTPLKNRSLDGKILLERWIAAKPWESRLMGDIYLDSPNMTPLSKKNENVELSFNSYGLKSRRNGATIRSSSKSLTTSQSTPSSSAVSSECMYDDSPLSTSCTSESPAKVEDTKERKIGKPSYTSLTASTKAKLKANRHSSPNLKRLFMDDDYLSHSTRTNILSADTRSISGSYSSANIWKDLYATPLRTSYQKRFTLGDK 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00632 437 ProSiteProfiles IQ motif profile. 117 144 IPR000048 GO:0005515
Trre15g00632 437 ProSiteProfiles IQ motif profile. 93 121 IPR000048 GO:0005515
Trre15g00632 437 MobiDBLite consensus disorder prediction 301 358 - -
Trre15g00632 437 PANTHER IQ-DOMAIN 5-RELATED 1 396 - -
Trre15g00632 437 MobiDBLite consensus disorder prediction 301 343 - -
Trre15g00632 437 MobiDBLite consensus disorder prediction 215 243 - -
Trre15g00632 437 Gene3D - 91 169 - -
Trre15g00632 437 MobiDBLite consensus disorder prediction 156 183 - -
Trre15g00632 437 SMART iq_5 115 136 IPR000048 GO:0005515
Trre15g00632 437 SMART iq_5 92 114 IPR000048 GO:0005515
Trre15g00632 437 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 81 135 IPR027417 -
Trre15g00632 437 Pfam IQ calmodulin-binding motif 95 114 IPR000048 GO:0005515
Trre15g00632 437 Pfam IQ calmodulin-binding motif 117 134 IPR000048 GO:0005515
Trre15g00632 437 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00632 Trre-Chr15 4618902 4622034 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00632 1 420 IQD Protein Family AT1G72670 43.256 2.54e-85 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00632 - - ahf:112710157 461.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g04599 11 57882402 57884677 Trre15g00632 15 4618902 4622034 PCT