Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00611 ATGGGGGGCATAGGTAAGACAACACTTGCTGCTGCAATGTTTCACAAAGTCTCTTTTCAGTATGAAGAATCTCCGAAAAATCCCGGACAACGAAGTAGATTATTTGATCCTAAGGAAATTTGTGGTGTGTTGAAAAATAATAGAGGAACCGATAATGTTGAAGCCATATTTTTTTATGCTAATGAATGTACAAATATAATTTTAAGCCCCCAAGCATTTGAAAAGATGGTAAACCTAAGGTTACTTGCTATTCATGACCAAAAGGGATATGTAAGCCTTCCACATGGTCTCGACTTATTGCCAGAAAATTTGAGATATGTTTCGTGGCATGGATATCCATGGAAATCTCTGCCTCCAACCTTTTGTCCTGAAATGCTTGTGGAGCTTTCCTTGAAAGAAAGCCATGTACAAAAACTATGGAACGGAGTATTGAATTTGCCAAATTTAGAGATACTTGACCTTAGTTCCTCCAAAAAGCTGATAGAATGTCCAAATGTGTCTGGTTTCCCAAATCTAAAAGAAGTAATACTTGGTGATTGTGAAAGCTTGCTTGAAGTTGATTCATCAATTTTCCTTCTCCAAAAGCTTACAAGAATATTCATGGCTGGATGCACATCACTAAAGAGCCTTTCGAGTAACACTTGTTCGCCAGCCCTCTTGGAGTTCAATGTTATCGATTGCATCAATCTCCAAGAGTTCTCGGTCACATTTTCTTCCGTTGATAATTTGTTTCTGGCTTTACCAAAGTGTGGTGGGAATGAACTTCCATCATCAATATTGCAAACAAAAAATCTTAAATTGTTTCTCTTTCCTATGATTGAAGATCTTGTGAATCTTCCTGAAAACTTTGCCGAAAATATTTTACTCACGAGTCCGGTGAATCGCGACATTGACCCTTCCATCGTCTTACATAAATTACTTTCTAGTCCTGCCTTCGTCAGTGTAACACACTTAAACTTGACCAATATTTCTGTCTTGTCTGAAATTCCAGACAATATCTACTTACTATCATCATTAGAGTCTTTAACACTAATTGGTCTGGCCATTAGAAGCTTGCCTGAAACCATCAAGTATCTTCCCCGAATCAGTGAGTTTGGTGTTTACGATTGTAAAATGCTTCAATCTATTCCGATGTTTTCAAAGTTCATTTCATCTTTAGTTGTCTGGAATTGTGAATCTATTGAGAAAGTGTTGATGAGTTCATCAACTCCTTGTTTGACTGTGCTCCTTAACTGCAATAAATTGGATATACATTCATACCAAACAGTTTTAAAAGATGCTATTGCTGGGATTGAACTTAGAGCAAGACTATCTTCACAACAAGACGTTACGTTTTTATCCAATGAGTATTTGTTACCTGTTATGCCTGGTAGAGAATATTGGTTCCAGTACACTTCTACACAAGTTTCTTTCACTCTTGATCTTCCTCGTAATTTATTTGGTTTTGCCTACTACTTGGTTATTTCTCAAGGCCGTGTAGAAAATGGTGCATATTTTCGATGTGAGTGTTATTTGGAAAATAGTGCTACTATAACAAGTTTCATGAGAGTCAAAAGCATGGGGCATCACTGGATTAATCTTGAGAATTCAATTCACATGATGTCAGATCATGTTGTTTTATGGTATGATCCAATAAGTTGCAAGCAGATAATGGATGCAGTTGAAGCCATTAATGATGTGAATAGCACCGGTTACAATCCAAAACTTACATTTAGATTCTTCATTGATGAAAGTGAAACTCTATATGATGAAATGACGATAAAAGAGTTAAGTTGCAAGAAGATAATGGAAGAAATAAAAGCCATTAATGATGTGAACAGCACCAGTTATAATCCAAAGCTTACATTTACATTCTTTATTGATGATACTCTATATGATGAAGTAGAAATAAAAGAGTGTGGGTTTCGCTGGATATATCAAGAAGAAGAAGAAGAAACAATTCATCCAAGAAGGAAATTAGATGCAACATAA 1971 0.3597 MGGIGKTTLAAAMFHKVSFQYEESPKNPGQRSRLFDPKEICGVLKNNRGTDNVEAIFFYANECTNIILSPQAFEKMVNLRLLAIHDQKGYVSLPHGLDLLPENLRYVSWHGYPWKSLPPTFCPEMLVELSLKESHVQKLWNGVLNLPNLEILDLSSSKKLIECPNVSGFPNLKEVILGDCESLLEVDSSIFLLQKLTRIFMAGCTSLKSLSSNTCSPALLEFNVIDCINLQEFSVTFSSVDNLFLALPKCGGNELPSSILQTKNLKLFLFPMIEDLVNLPENFAENILLTSPVNRDIDPSIVLHKLLSSPAFVSVTHLNLTNISVLSEIPDNIYLLSSLESLTLIGLAIRSLPETIKYLPRISEFGVYDCKMLQSIPMFSKFISSLVVWNCESIEKVLMSSSTPCLTVLLNCNKLDIHSYQTVLKDAIAGIELRARLSSQQDVTFLSNEYLLPVMPGREYWFQYTSTQVSFTLDLPRNLFGFAYYLVISQGRVENGAYFRCECYLENSATITSFMRVKSMGHHWINLENSIHMMSDHVVLWYDPISCKQIMDAVEAINDVNSTGYNPKLTFRFFIDESETLYDEMTIKELSCKKIMEEIKAINDVNSTSYNPKLTFTFFIDDTLYDEVEIKECGFRWIYQEEEEETIHPRRKLDAT 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00611 656 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 25 379 IPR044974 GO:0006952
Trre15g00611 656 Gene3D Ribonuclease Inhibitor 303 449 IPR032675 -
Trre15g00611 656 Gene3D Ribonuclease Inhibitor 49 246 IPR032675 -
Trre15g00611 656 SUPERFAMILY L domain-like 63 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00611 Trre-Chr15 4425063 4429113 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00611 22 453 WRKY Transcription Factor Family AT4G12020 31.498 1.98e-31 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00611 - - psat:127076381 698.738