Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00610 ATGGGGGGCATAGGTAAGACAACACTTGCTGCTGCAATGTTTCACAAAGTCTCTTTTCAGTATGAAGGTAGTTGCTTCTTAGAAAATGTGACAGAAGTATCATCAAAGCATGGAATCAACTATACATGCAACAAACTTCTTTCCAAGTTACTAAGGGAAGATCTTGATATTGACACTTCTAAATTAATACCATCCATGATCATTAGAAGACTCAAACGCATGAAATCTTTCATTGTGCTAGATGATGTACATACTTTAGAACTTCTGCAAAGCTTGATTGGAGTGGGATGTGGTTGGCTAGGAGCTGGTAGCACGGTCATTGTGACAACAAGGGATAAACATGTGTTGATAAGTGGAGGAATTGAAAAAATTCATCAAAAAGAGCAGTTGATTATTGATTATGCTGACGGCAATCCTTTAGCTCTAAAAGTATTAGGAGGATCATTTCTTCGCTATAAAAGTGAAATAGAATGGAAATGTGCACTAGCTAAACTCAAGGAAATTCCTAATGCAGAAATTGATAGGATATTTAGATGGAGTTATGATGAATTGGATGATAAAGACAAAAACATATTTCTAGATATAGCATGTTTTTTCAAAGGACATGAAAGGGAAAGGATAACAAAAATTTTAAATGAGTGTGGTTTCTTTGCAGATATAGGGATAAGACTTCTTTTAGACAAGGCTCTTATAAGACTTGACTTCAAAAATCGCATACAAATGCATGACTTAATACAAGAAATGGGAAAACAAATTGTTCGTGAAGAATCTCCGAAAAATCCCGGACAACGAAGTAGATTATTTGATCCTAAGGAAATTTGTGGTGTGTTGAAAAATAATAGAGGAACCGATAATGTTGAAGCCATATTTTTTTATGCTAATGAATGTACAAATATAATTTTAAGCCCCCAAGCATTTGAAAAGATGGTAAACCTAAGGTTACTTGCTATTCATGACCAAAAGGGATATGTAAGCCTTCCACATGGTCTCGACTTATTGCCAGAAAATTTGAGATATGTTTCGTGGCATGGATATCCATGGAAATCTCTGCCTCCAACCTTTTGTCCTGAAATGCTTGTGGAGCTTTCCTTGAAAGAAAGCCATGTACAAAAACTATGGAACGGAGTATTGAATTTGCCAAATTTAGAGATACTTGACCTTAGTTCCTCCAAAAAGCTGATAGAATGTCCAAATGTGTCTGGTTTCCCAAATCTAAAAGAAGTAATACTTGGTGATTGTGAAAGCTTGCTTGAAGTTGATTCATCAATTTTCCTTCTCCAAAAGCTTACAAGAATATTCATGGCTGGATGCACATCACTAAAGAGCCTTTCGAGTAACACTTGTTCGCCAGCCCTCTTGGAGTTCAATGTTATCGATTGCATCAATCTCCAAGAGTTCTCGGTCACATTTTCTTCCGTTGATAATTTGTTTCTGGCTTTACCAAAGTGTGGTGGGAATGAACTTCCATCATCAATATTGCAAACAAAAAATCTTAAATTGTTTCTCTTTCCTATGATTGAAGATCTTGTGAATCTTCCTGAAAACTTTGCCGAAAATATTTTACTCACGAGTCCGGTGAATCGCGACATTGACCCTTCCATCGTCTTACATAAATTACTTTCTAGTCCTGCCTTCGTCAGTGTAACACACTTAAACTTGACCAATATTTCTGTCTTGTCTGAAATTCCAGACAATATCTACTTACTATCATCATTAGAGTCTTTAACACTAATTGGTCTGGCCATTAGAAGCTTGCCTGAAACCATCAAGTATCTTCCCCGAATCAGTGAGTTTGGTGTTTACGATTGTAAAATGCTTCAATCTATTCCGATGTTTTCAAAGTTCATTTCATCTTTAGTTGTCTGGAATTGTGAATCTATTGAGAAAGTGTTGATGAGTTCATCAACTCCTTGTTTGACTGTGCTCCTTAACTGCAATAAATTGGATATACATTCATACCAAACAGTTTTAAAAGATGCTATTGCTGGGATTGAACTTAGAGCAAGACTATCTTCACAACAAGACGTTACGTTTTTATCCAATGAGTATTTGTTACCTGTTATGCCTGGTAGAGAATATTGGTTCCAGTACACTTCTACACAAGTTTCTTTCACTCTTGATCTTCCTCGTAATTTATTTGGTTTTGCCTACTACTTGGTTATTTCTCAAGGCCGTGTAGAAAATGGTGCATATTTTCGATGTGAGTGTTATTTGGAAAATAGTGCTACTATAACAAGTTTCATGAGAGTCAAAAGCATGGGGCATCACTGGATTAATCTTGAGAATTCAATTCACATGATGTCAGATCATGTTGTTTTATGGTATGATCCAATAAGTTGCAAGCAGATAATGGATGCAGTTGAAGCCATTAATGATGTGAATAGCACCGGTTACAATCCAAAACTTACATTTAGATTCTTCATTGATGAAAGTGAAACTCTATATGATGAAATGACGATAAAAGAGTTAAGTTGCAAGAAGATAATGGAAGAAATAAAAGCCATTAATGATGTGAACAGCACCAGTTATAATCCAAAGCTTACATTTACATTCTTTATTGATGATACTCTATATGATGAAGTAGAAATAAAAGAGTGTGGGTTTCGCTGGATATATCAAGAAGAAGAAGAAGAAACAATTCATCCAAGAAGGAAATTAGATGCAACATAA 2670 0.3547 MGGIGKTTLAAAMFHKVSFQYEGSCFLENVTEVSSKHGINYTCNKLLSKLLREDLDIDTSKLIPSMIIRRLKRMKSFIVLDDVHTLELLQSLIGVGCGWLGAGSTVIVTTRDKHVLISGGIEKIHQKEQLIIDYADGNPLALKVLGGSFLRYKSEIEWKCALAKLKEIPNAEIDRIFRWSYDELDDKDKNIFLDIACFFKGHERERITKILNECGFFADIGIRLLLDKALIRLDFKNRIQMHDLIQEMGKQIVREESPKNPGQRSRLFDPKEICGVLKNNRGTDNVEAIFFYANECTNIILSPQAFEKMVNLRLLAIHDQKGYVSLPHGLDLLPENLRYVSWHGYPWKSLPPTFCPEMLVELSLKESHVQKLWNGVLNLPNLEILDLSSSKKLIECPNVSGFPNLKEVILGDCESLLEVDSSIFLLQKLTRIFMAGCTSLKSLSSNTCSPALLEFNVIDCINLQEFSVTFSSVDNLFLALPKCGGNELPSSILQTKNLKLFLFPMIEDLVNLPENFAENILLTSPVNRDIDPSIVLHKLLSSPAFVSVTHLNLTNISVLSEIPDNIYLLSSLESLTLIGLAIRSLPETIKYLPRISEFGVYDCKMLQSIPMFSKFISSLVVWNCESIEKVLMSSSTPCLTVLLNCNKLDIHSYQTVLKDAIAGIELRARLSSQQDVTFLSNEYLLPVMPGREYWFQYTSTQVSFTLDLPRNLFGFAYYLVISQGRVENGAYFRCECYLENSATITSFMRVKSMGHHWINLENSIHMMSDHVVLWYDPISCKQIMDAVEAINDVNSTGYNPKLTFRFFIDESETLYDEMTIKELSCKKIMEEIKAINDVNSTSYNPKLTFTFFIDDTLYDEVEIKECGFRWIYQEEEEETIHPRRKLDAT 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00610 889 Gene3D - 1 117 IPR027417 -
Trre15g00610 889 SUPERFAMILY L domain-like 240 636 - -
Trre15g00610 889 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 195 IPR027417 -
Trre15g00610 889 Gene3D - 118 185 IPR042197 -
Trre15g00610 889 Gene3D Ribonuclease Inhibitor 283 479 IPR032675 -
Trre15g00610 889 PRINTS Disease resistance protein signature 70 84 - -
Trre15g00610 889 PRINTS Disease resistance protein signature 377 393 - -
Trre15g00610 889 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 617 IPR044974 GO:0006952
Trre15g00610 889 Gene3D Ribonuclease Inhibitor 531 681 IPR032675 -
Trre15g00610 889 Pfam NB-ARC domain 1 133 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00610 Trre-Chr15 4425063 4429113 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00610 3 686 WRKY Transcription Factor Family AT4G12020 30.842 9.76e-69 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00610 - - psat:127076382 1046.96