Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00609 ATGGGAAAACAAATTGTTCGCGAAGAATCTCTAAAAAATCCCGGACAACGCAGTAGATTATTTAATCCTAAGGAAGTTTGTGACGTGTTGAAAAATAATAGAGGAACTGAGATTGTTGAAACCATATTTTTAGATGCTAATGAATATAGAAAAATTAATTTAGGCCCCAAAGCATTTGAAAATATGGTAAACCTAAGCCATGTGCAAAAACTTTGGAATGGAATACTGAATCTGCCAAATTTAGAGACACTTGACCTCAGTAACTCCAAAATGCTAGTAGAGTGTCCAAATGTAGCCGGTTCTCCAAATCTAAAACGTGTAACACTTGATAATTGTGAAAGCTTGTCTGAGGCCGTATGGGACATGGTAAGAAACAATTCGTCCAAGAAAGAAATTAAAGCAAGACATCTTTGGAACTTCAACCGGCCTAGAATTAGATGTAACATAAGACTTGAGTTTTGGTGTATTACTGTCAAAAGCATGATCAAGACAACTTGCATCCAAAGAAATACAGATCAAGATGCCTTGTGA 531 0.3597 MGKQIVREESLKNPGQRSRLFNPKEVCDVLKNNRGTEIVETIFLDANEYRKINLGPKAFENMVNLSHVQKLWNGILNLPNLETLDLSNSKMLVECPNVAGSPNLKRVTLDNCESLSEAVWDMVRNNSSKKEIKARHLWNFNRPRIRCNIRLEFWCITVKSMIKTTCIQRNTDQDAL 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00609 176 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 135 IPR044974 GO:0006952
Trre15g00609 176 SUPERFAMILY L domain-like 42 125 - -
Trre15g00609 176 Gene3D Ribonuclease Inhibitor 29 156 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00609 Trre-Chr15 4421265 4422853 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00609 2 65 WRKY Transcription Factor Family AT4G12020 45.312 7.95e-10 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00609 - - psat:127076381 149.828