Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00607 ATGACTACAGTAAATCTGAAAAAGTATGATGTTTTCATCAGTTTTAGAGGCGATGACACTCGCGCTGGTTTCACAAGTCATCTTCATGCTGCCTTGAAGAGAAGCTATTTGGATACCTACATTGACTACAGGATTGAAAAAGGAGACCAAGTTTGGGCAGAACTTGAGAAAGCAATACTAGATTCCACTCTGTTTCTTGTTGTGTTCTCAGAGAACTATGCGAATTCAACATGGTGTTTGAACGAACTCGTTGAAATAATGGAGTGCCACAAAAATGGACAAGTTGTTATTCCTGTGTTCTACCAAGTTGATCCTTCACATGTAAGGAAACAAACAGGGAGTTATGGCACTGCGTTTGCAAACCACAAGAACCAAGCTGGCAACAATAATGATAAGATGATACAAAATTGGAAGAATGCTCTTTTTCAAGCAGCTAATTTATCTGGTTTTCATTCTTCCAATTACAGGACCGACTTTGACTTGATTGAAGACATTACCAGAGTTGTATTGAGAAAGTTAAACCACAACTACACAAATGATCTTACATGTAATTTCATATCGGATGAAAATTATCAGAGCATTCAAGCTTTAATAATGAAAGAAATTGATTCAACAGAAATTCAAATCATTGGACTTTGGGGCATGGGGGGCATAGGTAAGACAACACTTGCTGCTGCTATGTTTCACAAACTCTCTTTTCAGTATGAAGGTAGTTGCTTCTTAGAAAATGTGACAGAAGTATCAAAATTGAATGGAATCAACTATACATGCAACAAACTTCTTTCCAAGTTACTAAAGGAAGATTTTGATATTGACACTTCTAAAGTAATACCATCTATGATCATTAGAAGACTCAAACGAATGAAATCTTTGATTGTACTAGATGATGTACATACTTTAGAACTTCTGCAAAACTTGATTGGAGTGGGACATTGTTGGTTAGGAGCTGGTAGCACGGTCATTGTGACAACAAGGGATAAGCATATGCTGATAAGCGGAGGAATTGAAAAAATTCATCAAGTTAAAAAGATGAACTCCCAAAATTCTCTCCAACTTTTTAGCTTGAATGCTTTTGACAAAGTATTACCTACAGAGGGATATGTGGAGCTCTCAGAAAAAGCTATTGATTATGCTAAAGGCAACCCTTTAGCTCTGAAAGTATTAGGATCATCTCTTCGTTGTAAAAGTGAAATAGAATGGAACAGTGCACTAGCTAAACTGAAGGAAATTCCCAATGCAGAACTTGATAGAATTTTGAGATGGAGTTATAATGAATTGGATGACAAAGAGAAAAATATATTTTTGGACATTGCATGCATTTTGAAAGGTTGTAAACGGGATAATGCAACAAAAATATTAAATGAGTGTGGCTTCTTTGCAGATATAGGGTTAAGAGATCTTTTAGACAAGTCTCTTATAAGAGTTGACTTTGAAAATTGCATACAAATGCATGACTTGATACAAGAAATGGGAAAACAAATTGTTCGCGAAGAATCTCCTAAAAATCCCGGACAACGCAGTAGATTATGTGATCCTAAGGAAATTTTTGATGTGTTGAAAAATAATACAAATTTGCCAAAGTTAGATAGACTTGACCTCGGTGACTGCAAAAAGTTGATAGAGTGCCCAAATGTGTCTGGTTCCCCGAATCTAACGTTTTTAATGCTTGATGGTTGTGAAAGCATGCTTGAAGTTGATTCATCAGTTTTCTTTCTCCAAAAGCTTGAAGTTATAAAGATGTTGCATTGTAAATCAGTTAAGAAGCTTTCGAGTAGCACTTGTTCACCAGTCCTCAGAGAATTGTATGCTTTTGATTGCATCAATCTCAAAGAGTTGTCAGTCACATTTACTTCCGTTGATCATATGCATTTGGGTTTAACAGAGTGGGGTGGGAATGAACTTCCATCATCATTGTTGAATATGAAAAATGTTGGAATCTTTTACTTTCCTATGATTGAATGTCTTGTGGATCTTCCTGAAAACTTTGCCAATCATATTTACCTTGTGGGTCGACCGAATTGTGAACATGACCTTTCCATCACCTTACATAAAGTACTTTCTAGTCCTGCCTTCATCAGTTTAAAACACTTATACCTTAGTGGTATTCCTACCTTGTCTGAAATCCCAGACAGTATCATCTTACTATCGTCATTAGAGTCTTTAATGCTAATGTACATGGCCATTAAAAGCTTGCCTGAAAACATTAAGTATCTCCCCCAACTCAATCAACTTAATGTTTATGGTTGTAATAAGCTTCAATCTATTCCAGCGCTTTCGCAGTTCATTCCATTTTTCATTGTCTTGAATTGTGAATCTCTTGAGAAAGTGTTGAGTTCAATGTGTGAAGCATGTGACAAACCCAATCCTTGTTTTTCTGTGCTCATTAACTGCAAAAAATTGGATCTACATTCATACCAAACAGTTTTGGAAGATGCTATTGATGGGATTGAACTTCGAGCAAGACTAAATTCAGCAAATGAAGATGATATTATTGGGTACTTGTTACCTGATATGCCTGGCAGAGAGTATTGGTTCAATTACCGTTCTACACAAATTTCTTTCACTCTCGAGCTTCCTCCTAATTTGTTGGGTTTTGCCTACTACTTTGTTCTTTCTCAAGGCAACATGAAAAAAGGTGTAGATTCTGGATGTGAGTGCTACTTGGAATATAGTTCAGGCGAAAGGATCTCTATAACAAGTTTCACAAGATCCAAGTCATTCCTTTATGATTTAAGTTACAGTCCTTTACTCCACTTGATGTCAGATCATGTGGTTTTATGGTATGATCCAGTAAGTTGCAAGAAGATAATAGAAGAAATAAAAGCCTTTAAGGAATTGAACAGCACCAGTTACAGTCCAAAGCTTACATTTAGATTCTTTATTGATGAAGCTTTACATGATGGAAGTACGGATGATGGAGTAGCGATAAAAGAGTGTGGGTTTCGCTGGATATATCAAGAAGCAGCAGATTTTTCAACAGTTTTTGAATCTCAAGAAGAAGAAGAAGGAATTCATCCAAGAAAGAGATCTTTGAAACTATTGAAATATTGGGGTCCAAACAAGTCTCCTGAGAATTCCATGTGTAATTAG 3090 0.3615 MTTVNLKKYDVFISFRGDDTRAGFTSHLHAALKRSYLDTYIDYRIEKGDQVWAELEKAILDSTLFLVVFSENYANSTWCLNELVEIMECHKNGQVVIPVFYQVDPSHVRKQTGSYGTAFANHKNQAGNNNDKMIQNWKNALFQAANLSGFHSSNYRTDFDLIEDITRVVLRKLNHNYTNDLTCNFISDENYQSIQALIMKEIDSTEIQIIGLWGMGGIGKTTLAAAMFHKLSFQYEGSCFLENVTEVSKLNGINYTCNKLLSKLLKEDFDIDTSKVIPSMIIRRLKRMKSLIVLDDVHTLELLQNLIGVGHCWLGAGSTVIVTTRDKHMLISGGIEKIHQVKKMNSQNSLQLFSLNAFDKVLPTEGYVELSEKAIDYAKGNPLALKVLGSSLRCKSEIEWNSALAKLKEIPNAELDRILRWSYNELDDKEKNIFLDIACILKGCKRDNATKILNECGFFADIGLRDLLDKSLIRVDFENCIQMHDLIQEMGKQIVREESPKNPGQRSRLCDPKEIFDVLKNNTNLPKLDRLDLGDCKKLIECPNVSGSPNLTFLMLDGCESMLEVDSSVFFLQKLEVIKMLHCKSVKKLSSSTCSPVLRELYAFDCINLKELSVTFTSVDHMHLGLTEWGGNELPSSLLNMKNVGIFYFPMIECLVDLPENFANHIYLVGRPNCEHDLSITLHKVLSSPAFISLKHLYLSGIPTLSEIPDSIILLSSLESLMLMYMAIKSLPENIKYLPQLNQLNVYGCNKLQSIPALSQFIPFFIVLNCESLEKVLSSMCEACDKPNPCFSVLINCKKLDLHSYQTVLEDAIDGIELRARLNSANEDDIIGYLLPDMPGREYWFNYRSTQISFTLELPPNLLGFAYYFVLSQGNMKKGVDSGCECYLEYSSGERISITSFTRSKSFLYDLSYSPLLHLMSDHVVLWYDPVSCKKIIEEIKAFKELNSTSYSPKLTFRFFIDEALHDGSTDDGVAIKECGFRWIYQEAADFSTVFESQEEEEGIHPRKRSLKLLKYWGPNKSPENSMCN 1029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00607 1029 Gene3D - 343 427 IPR042197 -
Trre15g00607 1029 Pfam NB-ARC domain 195 423 IPR002182 GO:0043531
Trre15g00607 1029 SUPERFAMILY L domain-like 482 805 - -
Trre15g00607 1029 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 150 IPR035897 -
Trre15g00607 1029 Gene3D Ribonuclease Inhibitor 684 830 IPR032675 -
Trre15g00607 1029 Gene3D Ribonuclease Inhibitor 464 626 IPR032675 -
Trre15g00607 1029 PRINTS Disease resistance protein signature 523 539 - -
Trre15g00607 1029 PRINTS Disease resistance protein signature 209 224 - -
Trre15g00607 1029 PRINTS Disease resistance protein signature 378 392 - -
Trre15g00607 1029 PRINTS Disease resistance protein signature 284 298 - -
Trre15g00607 1029 ProSiteProfiles TIR domain profile. 7 173 IPR000157 GO:0007165
Trre15g00607 1029 SMART till_3 8 147 IPR000157 GO:0007165
Trre15g00607 1029 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 615 IPR044974 GO:0006952
Trre15g00607 1029 Gene3D - 171 333 IPR027417 -
Trre15g00607 1029 Pfam TIR domain 8 181 IPR000157 GO:0007165
Trre15g00607 1029 FunFam Disease resistance protein (TIR-NBS-LRR class) 5 175 - -
Trre15g00607 1029 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 175 437 IPR027417 -
Trre15g00607 1029 Gene3D - 6 170 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00607 Trre-Chr15 4410002 4417050 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00607 7 775 WRKY Transcription Factor Family AT4G12020 29.202 2.05e-59 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00607 - - psat:127076381 1129.39