Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00605 ATGCACTTGTCAAATTTAGAGAGATTTGACCTCACTGGCTCCAAAAAGTTGATAGAGTGTCCAAATATGTCTGGTTCCCCAAATTTAAAGTGTGTAATACTTAGTAATTGTGAAAGCTTGCTTGAAGTTGATTCATCAATTTTCTGTCTCCAAAAGCTTGAAAGATTAAACATTGCTGGATGTACTTCAGTTAAGAGCCTTTCAAGTAACACTTGTTCACCAGCCCTCCTTGAACTAAATGCTATGTATTGCATTAATCTCCAAGAGTTCTCAGTCACATTTGCTTCTGCTGATCAATATTTTGTTTTGGGTTTATCAAATTGGGGTGGGAATGAACTTCCATCATCAATATTGCATATCAAAAATCTTAAAACCTTTTTGTTTCCTTTGATTGAGTGTCTTGTGGATCTTCCTGAAAACTTTGCCGGTCGTATTTGGCTTGAGAATCCACAAAATTGTGAACATGACCCTTCCAACACCTTACATAAAGTACTTTCTAGTCCTGCTTTCATCAGTTTAAGACACTTAATACTTTGTAATATTTCTATGTTGTCTAAAATCCCAGACAATATCTCCTTACTAACGTCATTAGAGTCTTTAACACTAACCAATATGGCCATAATTACAAGCTTGCCTAAAACCATCAAGTATCTTCCCCGACTCATTGAACTTATTGTTTATGATTGTGAGATGCTTCAATCTATTCCGGCAGTTTCACTCCTTCTATTCCATTTCACTGTCTCAAATTGTCAATCTATTGAGACAGTCTTGAGTTCAATGGGTGAACCATATTACAAACCCAATCCTACTGTTACTCTCCTTGACAAACCGAATCCTAGTACTGTTACTCTCATTAACTGCAAAAAATTGGATTCTCGTTCGTACCAAACAGTTCTGAAAAATTGGATTGAACTTGGAGCAAGACGAAATTCCTTGAATGAAGAAGATGATACCATTCAGTACCTGTTTCCTGCTATGCAAGGCATAGAATATTGGTCCCATTACAGTTCTACACAAGTCTCTTTCACTCTTGAGCTTCCTCCTAATTTGTTTGGTTTTGCTTACTACTTGGTTCTTTCTCAAGGCCATGTGGGAAAATGTGTAAGTTATGGATGTGAGTGCTACTTGGACAACACTTCAGGTGAAAGGATTTGTATAACAAGTTTCCAAAGAGATGACGTCTTCAAATTTCGCTGGTATGAGAATATAATCCACATGATGTCAGATCATGTGATTTTATGGTATGATCGAGTAAGTTGCAAGAAGATAATGGAAGAAATAAAAGCCATTAATGATGTGAACAACACTGGTCACAGTCCAAAGCTTACATTTAGATTCTTTTTTGATGAAACTTTACATGATGAAGTAAAGATACAAGAGTGTGGTTTTCATTGGATATATCAAGAAGAAGCAGCTTCTTCAACAGTTTTTGAATCCCATGATGATGAAGATAAAGAAACAATTCCTCCAACAATGAAATTAAAGCAACGTATCTTTGGAAATCCAATGACAAAGGAATTAGATCAAACAAAAGGCTTGAGGTATTTACTTGAATAA 1557 0.3577 MHLSNLERFDLTGSKKLIECPNMSGSPNLKCVILSNCESLLEVDSSIFCLQKLERLNIAGCTSVKSLSSNTCSPALLELNAMYCINLQEFSVTFASADQYFVLGLSNWGGNELPSSILHIKNLKTFLFPLIECLVDLPENFAGRIWLENPQNCEHDPSNTLHKVLSSPAFISLRHLILCNISMLSKIPDNISLLTSLESLTLTNMAIITSLPKTIKYLPRLIELIVYDCEMLQSIPAVSLLLFHFTVSNCQSIETVLSSMGEPYYKPNPTVTLLDKPNPSTVTLINCKKLDSRSYQTVLKNWIELGARRNSLNEEDDTIQYLFPAMQGIEYWSHYSSTQVSFTLELPPNLFGFAYYLVLSQGHVGKCVSYGCECYLDNTSGERICITSFQRDDVFKFRWYENIIHMMSDHVILWYDRVSCKKIMEEIKAINDVNNTGHSPKLTFRFFFDETLHDEVKIQECGFHWIYQEEAASSTVFESHDDEDKETIPPTMKLKQRIFGNPMTKELDQTKGLRYLLE 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00605 518 Gene3D Ribonuclease Inhibitor 1 100 IPR032675 -
Trre15g00605 518 Gene3D Ribonuclease Inhibitor 152 261 IPR032675 -
Trre15g00605 518 SUPERFAMILY RNI-like 3 277 - -
Trre15g00605 518 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 23 246 IPR039203 GO:0050832
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00605 Trre-Chr15 4399469 4401790 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00605 3 228 WRKY Transcription Factor Family AT4G12020 28.821 1.69e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00605 - - psat:127076381 536.184