Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00604 ATGGCTTTGATTTCTTCTTCTTTCTCTCACTCTGCTGCTACAGCATCTCTGAAAAAGTATGATGTTTTCATCAGCTTTAGAGGAGATGACACTCGTGCCAGTTTCACAAGTCATCTTCATGATGCCTTGAAAAGAAAATATTTGGAGACATACATAGACTACAGGATTGAAAAAGGAAACCAAGTTTGGGCAGAACTTGAGAAAGCAATCCAAGATTCTACTCTGTTTCTTGTCGTGTTCTCAGAGAACTACGCAAATTCAACGTGGTGTTTAAATGAACTCGTTGAAATAATGGAGTGTAACAAAAATGAGGACAACGTTGTTGTTATTCCAGTGTTCTACCAAATTGACCCTTCGGATGTAAGGAAACAAACAGGGAGTTACGGCACTGCTTTGGCAAAACACAAGAAGCAAGGCAAGAATGATGATAAGATGATGCAAAATTGGAAGAATGCTCTTTCTGAAGCAGCTAATTTATCTGGTTATCATTCTGCCACATACAGGACCGACTCTAATTTGATTGAAGACATTACGAGAGTTGTATTAGAAAAGTTAAACCACAACAACGCAAATGAGCTCACATGTAATTTCATAATGGATGAAAACTACTCGACAGTTCTGTCTTCAATAAAACAAATTGATTCAAAAGAAGTTCAAAGCATTGGACTTTGGGGTATGGGAGGCATAGGTAAGACAACACTTGCTACTGCTATCTATAGCAAAATCTGTTATCAGTATGAAGGTAGATGCTTCTTAGACAATGTGACAGAAGTTTCAAAGATGCATGGAATCAACGATACATTCAAGAAACTTCTTTCCAAGTTACTAAGCGAAGATCTTGATATTGATACTTCTAAAGTAATACCATCCACAATCATTAGAAGACTCAAACGCATGAAATCTTTGATTGTACTAGATGATGTACATACTTTAGAACTTCTGCAAAATTTGATTGGAGTGGGACATGGTTGGCTAGGAGCAGGTAGCACGCTCATTGTGACAACAAGGGATAAACATGTGTTGATAAGTGGGGGAATTGAAAAAATTCATCAAGTTAAGAAGATGAACTCCCAAAATTCTCTCCAACTTTTTAGCTTGAATGCTTTTGACAAAGTATTACCTACAGAGGGATATCTGGAGCTCTCAGAAAAAGCTATTGATTATGCAGAAGGCAACCCTTTGGCTCTGAAAGTATTAGGATCATTACTTCGTTGCAGAAGTGAATTAGAATGGAACAGTGCACTAGCTAAACTAAAGGAAATTCCCAATGCAGAAATTGATAGGATATTGAGATGGAGTTATAATGAATTGGATGATAAAGAGAAAAACATATTTTTGGACATTGCATGCGTTTTGAAAGGTTATAAACGGGATAACGTAACACAAATATTAAATGAGTGTGGTTTCTTTGCAGATATAGGGATAAGACTCCTTTTAGACAAGGCTCTTATTAGAGTTGACTATGAAAATTGCATACAAATGCATGACTTGATACAAGAAATGGGAAAACAAATTGTTCGCGAAGAGTCTCCTAAAAATCCCGGACAACGCAGTAGATTATGTGATCCTAAGGAAGTTTGTGATGTGTTGAAAAATAATAGAGGAACTGAGATGGTTGAAGCCATATTTTTTGATGCTACTGAATATACAAATATTAGTTTGAGTCCCAAAGCATTTAAAAAAATGGTAAACTTAAGGTTACTTGTTTTTCGAGACCACAAGGAAATTAAATCTGTAAGCCTTCCACATGGTCTTGACTTATTGCCAGAAAATTTGAGATATTTCTTGTGGGATGGATATCCATCGAAGTCTCTGCCTCCAACCTTTTGTCCTAAAATGCTTGTAGAGCTCTCCCTGCAACAAAGTAGTGTATCAAAACTTTGGGATAAGGAAATGAATTTGCCAAATTTAGAGAGAATTGACCTCACTGGGTCTAAAAATTTGATAGAGTGTCCAAATTTGTCTGGTTCCCCGAATCTAACACATTTCAAATTCGACCATTGTGAAAGCATGACTGAAGTTGATTCATCAATTTTCCTTCTCCAAAAGCTTCAAATTTTACATGTGACGGGATGTAAATCACTTAAGAGCCTTTCAAGTAGCACTTGTTCACCAGCCCTCCAAGAATTGCATGCTTTTTATTGCGACAATCTCCAAGACTTTTCAGTCACATTTTCTTCCACTGATCATTTGGATTTGGGTTTAACACATGGTTGGAATGGGAATGTACTTCCATCATCATTGTTGAATAAAAAAAATCTTGAAATCTTGTACTTTCCTCTGATTGAATGTCTAGCGGATCTTCCTGAAAACTTTACAAATTATATTTGGCTTGAGAATCCACCGAATTGTGAACATGACCCTTCCATCATCTTACATAAAGTACTCCCTAGTCCTGCCTTCCCCAGTTTAAAATACTTAACCATTTCTTATATCCCTATGTTGTCTGAAATCCCAGACAATATCTCCTTACTATCCTCATTAGAGTATTTAAAACTAGTTGCTATTGCCATTAGAAGCTTGCCTGAAACCATTAAGTATCTTCCCAAACTCCTTCAACTTAGTGTTTACGATTGTGAAATGCTTCAATCTATTCCGGCGCTTTCACTCAATCTAATCAATTTCACTGTCTCAAATTGTGAATCTCTTGAGACAGTGTTGAGTTCAATGGGGGAACCATATAATCACAAACCCAATCTTTGTACTGTTTTTCTCCTTAACTGCAAAAAATTGGATTCTCATTCGTACCATACAGTTCTGAAAGATGCTATTGCTGGGATTGAACTTGGAGCAAATGAAGAAGATGATACCATTCAGTACCTGTTACCTGTTATGCCAGGCATAGAATATTGGTCCCATTACACTTCTACACAAGTCTCTTTCACTCTTGAGCTTCCTCCTAATTTGTTGGGTTTTGCCTACTACTTGGTTCTTTCTCAAGGCCATGTGGGAGTTGGTGTAGGTATTCGATGTGAGTGCTACTTGGACAATATTTCAGGTGAAAGGATCTGTATAACAAGTTTCCTAGGTGCCAACATCTTCAAATTTTACTGGTGTGATGGTAGTAACAATAAAATCCACATGAAGTCAGATCATGTGGTTTTATGGTATGATACAGTAAGTTGCAAGCAGATAATGGAAGAAATAAAAGCCATTAATGATGTAAACAACACCAGTTACAATCCAAAGCTAACGTTTACATTCTTTATTGATGAAACTTTACATGAAGTAACAATAAAGAAGTGTGGTGTTCGCTGGATATATCAAGGAGAAATGGTTTCTTCTACAATTTTTGAATCCCTTGATGAAGAAGAAACTGCGTCTTCATCATATTTTCAATCCAATGATCAAGAACAAACAGTGCCTCCAACAATTATTGAATCAGATGATCAAATACAAATAGTTCTTCCAACAAATTTCGAATTAGATGAAACAAAAGACTTGAGGTGTTTACTTGAAGAACTCATGCATATTGGATTTGGTGGAGACCACATGAACACTTTGTTATTTGGAGAGGAAAAAAAGGAATGA 3531 0.3645 MALISSSFSHSAATASLKKYDVFISFRGDDTRASFTSHLHDALKRKYLETYIDYRIEKGNQVWAELEKAIQDSTLFLVVFSENYANSTWCLNELVEIMECNKNEDNVVVIPVFYQIDPSDVRKQTGSYGTALAKHKKQGKNDDKMMQNWKNALSEAANLSGYHSATYRTDSNLIEDITRVVLEKLNHNNANELTCNFIMDENYSTVLSSIKQIDSKEVQSIGLWGMGGIGKTTLATAIYSKICYQYEGRCFLDNVTEVSKMHGINDTFKKLLSKLLSEDLDIDTSKVIPSTIIRRLKRMKSLIVLDDVHTLELLQNLIGVGHGWLGAGSTLIVTTRDKHVLISGGIEKIHQVKKMNSQNSLQLFSLNAFDKVLPTEGYLELSEKAIDYAEGNPLALKVLGSLLRCRSELEWNSALAKLKEIPNAEIDRILRWSYNELDDKEKNIFLDIACVLKGYKRDNVTQILNECGFFADIGIRLLLDKALIRVDYENCIQMHDLIQEMGKQIVREESPKNPGQRSRLCDPKEVCDVLKNNRGTEMVEAIFFDATEYTNISLSPKAFKKMVNLRLLVFRDHKEIKSVSLPHGLDLLPENLRYFLWDGYPSKSLPPTFCPKMLVELSLQQSSVSKLWDKEMNLPNLERIDLTGSKNLIECPNLSGSPNLTHFKFDHCESMTEVDSSIFLLQKLQILHVTGCKSLKSLSSSTCSPALQELHAFYCDNLQDFSVTFSSTDHLDLGLTHGWNGNVLPSSLLNKKNLEILYFPLIECLADLPENFTNYIWLENPPNCEHDPSIILHKVLPSPAFPSLKYLTISYIPMLSEIPDNISLLSSLEYLKLVAIAIRSLPETIKYLPKLLQLSVYDCEMLQSIPALSLNLINFTVSNCESLETVLSSMGEPYNHKPNLCTVFLLNCKKLDSHSYHTVLKDAIAGIELGANEEDDTIQYLLPVMPGIEYWSHYTSTQVSFTLELPPNLLGFAYYLVLSQGHVGVGVGIRCECYLDNISGERICITSFLGANIFKFYWCDGSNNKIHMKSDHVVLWYDTVSCKQIMEEIKAINDVNNTSYNPKLTFTFFIDETLHEVTIKKCGVRWIYQGEMVSSTIFESLDEEETASSSYFQSNDQEQTVPPTIIESDDQIQIVLPTNFELDETKDLRCLLEELMHIGFGGDHMNTLLFGEEKKE 1176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00604 1176 SMART till_3 19 159 IPR000157 GO:0007165
Trre15g00604 1176 Gene3D Ribonuclease Inhibitor 529 735 IPR032675 -
Trre15g00604 1176 SMART AAA_5 217 356 IPR003593 GO:0016887
Trre15g00604 1176 Gene3D - 354 438 IPR042197 -
Trre15g00604 1176 SUPERFAMILY "Winged helix" DNA-binding domain 425 531 IPR036390 -
Trre15g00604 1176 Gene3D - 17 182 IPR035897 -
Trre15g00604 1176 Gene3D Ribonuclease Inhibitor 791 941 IPR032675 -
Trre15g00604 1176 SUPERFAMILY L domain-like 545 913 - -
Trre15g00604 1176 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 162 IPR035897 -
Trre15g00604 1176 PRINTS Disease resistance protein signature 220 235 - -
Trre15g00604 1176 PRINTS Disease resistance protein signature 295 309 - -
Trre15g00604 1176 PRINTS Disease resistance protein signature 632 648 - -
Trre15g00604 1176 PRINTS Disease resistance protein signature 389 403 - -
Trre15g00604 1176 ProSiteProfiles TIR domain profile. 18 185 IPR000157 GO:0007165
Trre15g00604 1176 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 189 448 IPR027417 -
Trre15g00604 1176 Pfam NB-ARC domain 212 436 IPR002182 GO:0043531
Trre15g00604 1176 FunFam Disease resistance protein (TIR-NBS-LRR class) 16 187 - -
Trre15g00604 1176 Pfam TIR domain 19 191 IPR000157 GO:0007165
Trre15g00604 1176 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 723 IPR044974 GO:0006952
Trre15g00604 1176 Gene3D - 183 345 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00604 Trre-Chr15 4387796 4392552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00604 15 858 WRKY Transcription Factor Family AT4G12020 32.089 1.27e-97 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00604 - - psat:127076382 1387.47