Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00603 ATGGCTTTCTCTCTACTTTACTTTCTCCTCTACTCACTGATTCTTCAATCCATCAGTGTTGTAGCTCAAACTAAAAGTACTATAGCTATTGGTGATTCTTTTACTGCACAAACCAATAACTCTACATGGTTGCTTTCACCTTCTGGTGACTTTGCCTTTGGTTTTATTCCACTTGAAAACACTGATCTATTTTTGCTTTCCATTTGGTATGCCAAAATTTCTGACAAAACTGTTGTGTGGTATGCTAATAGAGACAGTCCTGCACCAAAAGGGTCAAAAGTGGAGCTCCATGCCAATGATGGGTTATTGCTAACTTATCCAAATGGTGACGGGTTATGGAATACTACTGAGGTAATCACTGAAGGAATTTTTCGCGGTGTGTTCAATGACACTGGCAACTTTGTGCTTGAGAATGCTAATTCCAAAAGTGTTTGGGAGACTTTCAAGTTTCCTAGAGACACCTTGTTGCCTTCTCAAGTTGTTGAAAAAGAAGGAAGGCTTTCTTCAAGGCATAAGGAGACAAATTTCAGTAAAGGAAGGTTTGAGCTTCTTTTACAAGGTAATGGTGATCTTGTTATGCACCCTATTAATTTACCATCTGGCTATGCTAATGGAGACGACTACTATCTTAGTAATACTTTTGGAACCAATACATCAAGTGCTGGAACTCAGTTGGTCTTTGACAGATCAGGGTACTTGTATATCTTGGGAGAGAAGGGTGAGAAATTCAATTTGTCAGAAGTAGAGAGTAATGTCTCAACCACTGATTTTTATCTTAGAGCAACTCTTAATTTCGATGGAGTCTTCATACTTTACAAATATCCAAAGAGTTCAACTGAGAGTGAAGGTTGGACCACAGTGTGGTCTCAACCTGAAAATATATGTAGTTATAGTACTAGAGATAGTAGTGGTGTTTGTGGATACAATAGCTTCTGCACTTTGGGAGATGATAAGAGACCAAAATGTCAATGTCCAAAAGGTAGTTACTCACTGATTGATCCTGATGATCCATATGGTAGCTGCAAGGCAGATTTCATACAAGGATGTGAAGAGGACGAACTAAGTAAAAACATAAATGATCTCTATGAATTTGAGACTTTGAATAACATTGATTGGCCTAATTCAGATTCTGTGATTCAAAAGCCTTTTACTGAAGAACAATGTAAGAAAGCTTGTATGGAAGATTGTTTGTGTTCTGTGGCTATTTTCAGGTATGGTAATAGTTGTTATAAGAAGAAGTTACTACTCTCAAATGGGAGATTTGATGCAACACTTGGTTCTAAGGCCTTCTTGAAAGTGAGAAAAGATAATACCTCCCTTGTTCCTACAATTCCTACAATTCCAATAATTGTGAACAAGAATAATAATAGACATACTTTGGTTTTGGTTGGTTCTGCTATTCTTAATGTTGCATTTATTGTAGCAATATGTGTCTGCATCTCCTTCATTTTCCAGTACAAGAAGAAGCTTATTAGTGCTAGCAGAAGTGGCACTTTTGTTGAAATTGAATCCAATTTGCGTTGTTTCACATACGAAGAGCTTGAAGAAGCTACCAATGGATTTGACAAAGAGCTAGGAAGGGGAGCTTTTGGTATTGTTTATGAAGGAGTCATCAACACAGCTTCCAAAACTCGAGTGGCAGTGAAAAAGTTGAGCAGTTTTTTGTTGGATCAAGGTCATAGGGAATTCAGGAATGAACTAAATTCCATTGGTCTCACTCATCACAAGAACTTGGTTCGTTTATTTGGATTTTGTGAGCGTGGAAGTGAAAGATTGCTTGTTTACGAGTACATGAGCAATGGCACTTTGGCAAGTTTTCTATTCAATGTTGTCGAGAAACAGAAACCAAGTTGGAAAGTAAGACTAGAAATTGCAATAGGGGTAGCTAGAGGGCTTGTGTATTTACATGAAGAGTGCATCACTGGGATCATCCATTGTGACATAAAGCCTCAAAACATACTCCTCGACGATTACTTCAATGCAAGAATATCTGACTTTGGATTAGCCAAGATGTTAAACATGAATCAGAGCAAAACCAACACAGGCATAAAGGGAACGAGAGGGTATGTTGCCGTTGAATGGTTTAAAAACTTGCCTATCAACGCTAAGGTGGATGTGTATAGTTATGGAGTAGTATAA 2139 0.3787 MAFSLLYFLLYSLILQSISVVAQTKSTIAIGDSFTAQTNNSTWLLSPSGDFAFGFIPLENTDLFLLSIWYAKISDKTVVWYANRDSPAPKGSKVELHANDGLLLTYPNGDGLWNTTEVITEGIFRGVFNDTGNFVLENANSKSVWETFKFPRDTLLPSQVVEKEGRLSSRHKETNFSKGRFELLLQGNGDLVMHPINLPSGYANGDDYYLSNTFGTNTSSAGTQLVFDRSGYLYILGEKGEKFNLSEVESNVSTTDFYLRATLNFDGVFILYKYPKSSTESEGWTTVWSQPENICSYSTRDSSGVCGYNSFCTLGDDKRPKCQCPKGSYSLIDPDDPYGSCKADFIQGCEEDELSKNINDLYEFETLNNIDWPNSDSVIQKPFTEEQCKKACMEDCLCSVAIFRYGNSCYKKKLLLSNGRFDATLGSKAFLKVRKDNTSLVPTIPTIPIIVNKNNNRHTLVLVGSAILNVAFIVAICVCISFIFQYKKKLISASRSGTFVEIESNLRCFTYEELEEATNGFDKELGRGAFGIVYEGVINTASKTRVAVKKLSSFLLDQGHREFRNELNSIGLTHHKNLVRLFGFCERGSERLLVYEYMSNGTLASFLFNVVEKQKPSWKVRLEIAIGVARGLVYLHEECITGIIHCDIKPQNILLDDYFNARISDFGLAKMLNMNQSKTNTGIKGTRGYVAVEWFKNLPINAKVDVYSYGVV 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00603 712 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 34 712 - -
Trre15g00603 712 ProSitePatterns Serine/Threonine protein kinases active-site signature. 643 655 IPR008271 GO:0004672|GO:0006468
Trre15g00603 712 Gene3D - 19 150 IPR036426 -
Trre15g00603 712 Pfam D-mannose binding lectin 77 163 IPR001480 -
Trre15g00603 712 Gene3D Transferase(Phosphotransferase) domain 1 598 712 - -
Trre15g00603 712 PIRSF SRK 1 712 IPR024171 GO:0004674
Trre15g00603 712 Gene3D Phosphorylase Kinase; domain 1 483 597 - -
Trre15g00603 712 Gene3D - 152 296 IPR036426 -
Trre15g00603 712 Pfam PAN-like domain 363 409 IPR003609 -
Trre15g00603 712 SUPERFAMILY alpha-D-mannose-specific plant lectins 64 212 IPR036426 -
Trre15g00603 712 SMART blect_4 35 151 IPR001480 -
Trre15g00603 712 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 22 149 - -
Trre15g00603 712 Pfam Protein kinase domain 522 712 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g00603 712 ProSiteProfiles Bulb-type lectin domain profile. 30 149 IPR001480 -
Trre15g00603 712 SUPERFAMILY Protein kinase-like (PK-like) 498 712 IPR011009 -
Trre15g00603 712 CDD B_lectin 38 151 IPR001480 -
Trre15g00603 712 CDD PAN_AP_plant 359 433 - -
Trre15g00603 712 SMART serkin_6 519 712 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g00603 712 ProSitePatterns Protein kinases ATP-binding region signature. 525 550 IPR017441 GO:0005524
Trre15g00603 712 FunFam Os07g0541700 protein 598 686 - -
Trre15g00603 712 FunFam S-receptor-like serine/threonine-protein kinase 487 597 - -
Trre15g00603 712 ProSiteProfiles Protein kinase domain profile. 519 712 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00603 Trre-Chr15 4376247 4378385 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00603 447 712 Receptor kinase-like Gene Family AT2G23950 41.429 1.29e-56 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Trre15g00603 Pkinase 3.8e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00603 - - gmx:100795822 907.516