Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00587 ATGGACACTATTTGGATTCTGTTTATGACACCAATTTTCTTGTGCAGTTTGATCTTCTGCATAAACAAACTTAGTCATAAGCTCAAACCAAACCACAGAAATCAGCTTCCACAAGGCACTCTTGGATGGCCTTTTATTGGTGAGACCATAGAGTTTGTTTCTTGTGCTTACACCGATCGTCCTGAGAGCTTCATGAACAAGCGACGCGCCATGTATGGTAAGGTGTTCAAGTCACACATATTTGGAAGTCCTACTATTGTTTCAACAGATGCAGATGTGAACAAATTTATACTACAAAGTGATGCAAAGGTTTTTGTTCCTTCTTATCCTAAGTCCTTGATGGAGTTAATGGGAGAGTCTTCTATTTTGCTAATCAATGGAACCTTACAAAGGAGAATACATGGACTTATTGGAGCTTTTTTCAAGTCTCAACAGTTAAAGATTCAGATTACCAAAGATATGCACAAGTATGTTCAAGAATCAATGGAAAATTGGAAAGAGGATCAACCTATATACATACAAGATGAAACAAAAAAGATTGCATTTCATGTACTAGTGAAGGCATTGATTAGTTTGGAACCAGGTGAAGAAATGGAACTTCTAAAAAAACATTTTCAAGAATTTATATCTGGCTTAATGTCTTTACCAATAAACCTACCAGGAACAAAACTTTATCAATCTTTACAGGCAAAAAAGAAAATGGTTAAATTAGTGAGAAAAACTATCCAAGCTAGAAGAAATAAAAGCATCTTTGAAATTCCAAAAGATGTAGTGGATGTGCTTCTTAATGATACAAGTGAAAAATTAACAGATGATTTAATAGCAGATAATATTATTGATATGATGATTCCTGGAGAGGATTCAGTTCCAGTTCTTATGACTCTAGCTACAAAGTACTTATCAGAATGCCCTGCTGTTTTGCAACAATTGACGGAGGAAAATATAAAGCTAAAGAAACTCAAAGATGAGATTGGAGAGCCTATGTGTTGGAGTGATTACTTATCATTGCCATTTACTCAAAAAGTTATAACAGAAACTTTGAGAATGGGAAATATTATAAATGGTGTTATGAGAAAGGCCTTAAAAGATGTTGAAATAAAAGGGTATTTAATACCACAAGGATGGTGTGTGTTTGCAAATTTTAGATCAGTTCATCTAGATGATAAAAATTATGAGTGCCCTTATCAATTCAATCCATGGAGGTGGCAAGACAAGGACATGAACAGTAACAATTTCACTCCTTTTGGAGGGGGGCAAAGGTTGTGTCCTGGCCTTGACTTGGCCAGATTGGAAGCTTCCATCTTTTTACACCACCTTGTTACTCAGTTCAGATGGTATGCTGAAGAAGATACAATAGTGAACTTCCCTACAGTAAGAATGAAAAGAAGGATGCCTATTTTAGTAAAGAGAGTGTAA 1416 0.3538 MDTIWILFMTPIFLCSLIFCINKLSHKLKPNHRNQLPQGTLGWPFIGETIEFVSCAYTDRPESFMNKRRAMYGKVFKSHIFGSPTIVSTDADVNKFILQSDAKVFVPSYPKSLMELMGESSILLINGTLQRRIHGLIGAFFKSQQLKIQITKDMHKYVQESMENWKEDQPIYIQDETKKIAFHVLVKALISLEPGEEMELLKKHFQEFISGLMSLPINLPGTKLYQSLQAKKKMVKLVRKTIQARRNKSIFEIPKDVVDVLLNDTSEKLTDDLIADNIIDMMIPGEDSVPVLMTLATKYLSECPAVLQQLTEENIKLKKLKDEIGEPMCWSDYLSLPFTQKVITETLRMGNIINGVMRKALKDVEIKGYLIPQGWCVFANFRSVHLDDKNYECPYQFNPWRWQDKDMNSNNFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFRWYAEEDTIVNFPTVRMKRRMPILVKRV 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00587 471 FunFam 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 26 471 - -
Trre15g00587 471 SUPERFAMILY Cytochrome P450 32 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00587 471 CDD CYP90-like 68 470 - -
Trre15g00587 471 Gene3D Cytochrome P450 26 471 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00587 471 Pfam Cytochrome P450 37 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00587 471 PRINTS E-class P450 group I signature 422 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00587 471 PRINTS E-class P450 group I signature 412 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00587 471 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00587 471 PRINTS E-class P450 group I signature 340 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00587 471 PRINTS E-class P450 group I signature 380 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00587 471 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 415 424 IPR017972 GO:0005506|GO:0016705
Trre15g00587 471 PANTHER CYTOCHROME P450 26 33 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00587 Trre-Chr15 4212486 4215897 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00587 26 444 Cytochrome P450 AT3G13730 68.160 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00587 K12638 - gmx:100797868 814.683