Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00528 ATGGAAAGTATACGACGACGAGGATCCAAGTTCGAGGAGTTTGAGGAAACAGACGTTAAAACGTTACTTCTAGAGTTCTTTAGTGTTATACTGATCACAAAAACCTTCAATCCACATTGTGCTACTGATCAGAATTTCACTGCTGCTACACTCCAAGACATGGCCTGCACTTGCATCTCCTCTTCCCTTTTCACTCCTCTTCAACCCCGTCACCGACCACATTTCCCTGCCGCCACTTTTCACTCTTGTCCCTCCATTCATCTAACCCCTTCTCACCCTTTTTGCCTTTACGCCCTTCCCCTCTTCACCGGCAACAACAATAACAATGGTGGTGATGGTGGTTTCTGGGGTAATAACCCTTTTAACTCAGATGATGATTTCTCTTCATCTTCTTCACGTTATCCTTACACCTTTTCTTTACCTTACATTTTGTTTCTGCAACCTCCTTCTAACCGAATTCGCTACCTGACAGAACCTGTATTTGCTGCTGCATCTTATAGTGAAAACACAGAGGAGGAAAGCTCGTCACTGCCTGCCGAAATAACAATCGGAATTGACATTGGCATGTGGCCATGTTGTATTTCTGTGTGGAATGATTCAGAAGTAGGTTTGCAAAAGAAAATAAATGAGACGATGAAGATATCTTGCGAAACTTCCAAAAATCATGAAGCTAGTAGTACTGAAGTCTCACTCTCCCTAGAAAATGAGATTACAATTTTATACATGAAACCCTTTTGTAGCATAATTTTCGGTGAAAATGCAAGTTTCCCATTTCTGATGCATACCGTGGATATTAAGGTTCGCCCTTTTGCTGCTGCATTTGTGAACAAACTGTGGAAATCAACTACTGCAGGAGAACTACTTGGAAAATTTATGATAGAATTGAGATACATGGTTGAAACTCATCTGAACAGACCTATAAGAAATGTAGTTTTTACAGTTCCAGTTTCATTCAGTCGATTGCAGCTAAACTGGATACGTTGCGCTTGTGCGATGGCTGATCTTAAAGTTATCAGATTGATGCCTAAACCAACAGCAGTGGCTTTGTGGTATATGGTTCATCAACTGAATTCTTCGGCTTTTGACAATGAAAGCATGAAAATTGCTCTCATTTTCAACATGGATGCAGGTTATTGTGATGTTTCTGTTATTGAAGCAGAAAAAGGAAAATTCCGAATAAAAGCCATGACGGGAAGTACTATTGGTGGAGAAGATTTGCTTGGAAATATGATGTGTTATCTTTTACCTGATTTTGAAGAAATATTCAAGAGACATGTTCATTGGAACTCAGAAATTATATCAATGGCTTTTCTTCGAAGTAGAATTCATGACGTGATTACTAAGCTTTCGTCTAAGACAAGTGTTGAGGTTGATTTAGATTTGGGATATGGTTTGAAGATATGCAAGGTTGTAACGCGGAAGGAGTTTGAGGAAGTTAACAAAGAAGTGTTTGAGAAGTGTGAAAAGTTAATCATCCAATGCTTGCAAGATGCAAAGATAGAAGTTGAGAATATAAATGATGTGATAATTGTTGGTGGATGTTGTAATATACCAAGAGTGAAGAATCTTGTTACTGAAATATGCAATGGAAAGGAAATTTATAAAGGTATGAATCCTTTGAATGCTGTACTTTGTGGTGCAGCAGTGGCAGGATCTGTTGATGATGATGCCATTGGTAAAGTCATGATATCAAAAATATAG 1701 0.3868 MESIRRRGSKFEEFEETDVKTLLLEFFSVILITKTFNPHCATDQNFTAATLQDMACTCISSSLFTPLQPRHRPHFPAATFHSCPSIHLTPSHPFCLYALPLFTGNNNNNGGDGGFWGNNPFNSDDDFSSSSSRYPYTFSLPYILFLQPPSNRIRYLTEPVFAAASYSENTEEESSSLPAEITIGIDIGMWPCCISVWNDSEVGLQKKINETMKISCETSKNHEASSTEVSLSLENEITILYMKPFCSIIFGENASFPFLMHTVDIKVRPFAAAFVNKLWKSTTAGELLGKFMIELRYMVETHLNRPIRNVVFTVPVSFSRLQLNWIRCACAMADLKVIRLMPKPTAVALWYMVHQLNSSAFDNESMKIALIFNMDAGYCDVSVIEAEKGKFRIKAMTGSTIGGEDLLGNMMCYLLPDFEEIFKRHVHWNSEIISMAFLRSRIHDVITKLSSKTSVEVDLDLGYGLKICKVVTRKEFEEVNKEVFEKCEKLIIQCLQDAKIEVENINDVIIVGGCCNIPRVKNLVTEICNGKEIYKGMNPLNAVLCGAAVAGSVDDDAIGKVMISKI 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00528 566 Gene3D - 240 290 - -
Trre15g00528 566 SUPERFAMILY Actin-like ATPase domain 181 354 IPR043129 -
Trre15g00528 566 Gene3D - 183 551 - -
Trre15g00528 566 PANTHER HEAT SHOCK PROTEIN 70KDA 183 552 IPR013126 GO:0005524|GO:0140662
Trre15g00528 566 Pfam Hsp70 protein 183 553 IPR013126 GO:0005524|GO:0140662
Trre15g00528 566 SUPERFAMILY Actin-like ATPase domain 368 552 IPR043129 -
Trre15g00528 566 PRINTS 70kDa heat shock protein signature 181 194 - -
Trre15g00528 566 PRINTS 70kDa heat shock protein signature 310 330 - -
Trre15g00528 566 PRINTS 70kDa heat shock protein signature 505 521 - -
Trre15g00528 566 PRINTS 70kDa heat shock protein signature 377 387 - -
Trre15g00528 566 PRINTS 70kDa heat shock protein signature 537 557 - -
Trre15g00528 566 Gene3D - 356 534 - -
Trre15g00528 566 Gene3D Actin; Chain A, domain 4 403 486 - -
Trre15g00528 566 CDD HSP70_NBD 261 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00528 Trre-Chr15 3753186 3757337 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00528 183 553 Calmodulin-binding Proteins AT1G56410 31.606 8.97e-46 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00528 K09489 - gmx:100809773 373.629