Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00502 ATGGGAATGTTTCTGTATTTTCTTTTGTTATTGCTTTGCGTCCTTAATACGGTTTTAATACAAGCTCAGGATGATCAATCAGGATTCATCAGCATAGATTGTGGTCGTCCTGATCATTTGAACTATTCTGACAAGATTACAACCATAAATTACACTTCAGATGCCAATTTCAGAAATACAGGTGTGAGTAAGAGGTTATTAGGCAATTCTGAAAAGCTTAGTCAACAACTGGAATACCTGAGAAGCTTTCCTAATGGAGTGAGAAATTGTTACAGAATAAATGTAATAAGTGGTACTAAATATTTAATCAGAGCTTTTTTCTATTATGGTAACTATGACAATCTAAACCAGCCACCACAATTTGATCTTCATTTTGGAGCTAATGTTTGGGGTACAGTGAAGTTAACCGATTTATCAAGCATCATAACTAGTGAGATAATTTACACTCCATCACTAGATTACATACAACCATGTCTTGTTAACATTGGCAAAGGGACTCCATTCATTTCAGCTATAGAATTGAGGCCTTTGAGCAATACAGCTTATGTCATAGACTCAACAAATTCGGTATTATCAAGTGTTTACCGATATGATTCAGGCTCCATCACAAACTCAGGATACAGGTACAAAGATGATGTTTATGATCGCATCTGGGAGCCTTTTAAATTTAATAATTTCAATAATTTAAACAGCTCATTTAGCTTAGATAGTCTAGTTCAGAATGGTTATATTTATATACCACCAATTGTGATGAGCACTGCCGTTACACCAGTAAATCCTGAAAGTAGTATTGACATTATTTGGAAATCACACAATAAATATGACCAATACTACCTCTACATGCACTTTAGTGAAGTTGAAAAGTTGGCAGAAAATGAAGCTAGAGAGTTCAATATCAAAGTGAATGGCAAATTTTGGCATGGACCTGTGAGGCCTGTATACCAAGAAGTAACTACCGTATCAAGTCCCTCTGCTTTGACTGGAGCAAAAAGGTATGAAATTTCCCTTTCTAAGACAGAGACTTCAACCCTTCCACCCATCCTCAACGCCTTTGAGATTTATAAAGTAAAAGACTTCTCACAATCAGAAGGTTCACTGTCAAATAGCCTGGATCCAAACCTGTGTGAACCTGCTTCATGCAACCAAAAGAAAGGTGATCAGAAAAAGAAGAAAAATAATATAACCATTCATGTAGCATCAGTTGCTGTGATTTTGGTGCCCCTAGTCCTAGCAAGTGCAGCAGCTATCATCTTTTTCCTTCACAAAAGAAAACTACAAGCAGCTGCGAACAATCATGTGCAGTCAAATACTCCAAATGATTCACAATTGGAATCCAAGCAAAGACAAAATGAGTCACAATTGGAATCCAAGCAGAGACAATATACATATGATGAAGTTGACGAGATCACCAACAACTTGAATAGAATTCTTGGTAGAGGTGGATTTGGAACAGTTTATTATGGCCTAATTGATGACATTGAAGTAGCTGTCAAGATGCTTTCTAAATCATCAGTACAAGGATATCAACAATTTCTAGCAGAGGTTAAGCTTCTGATGAGAGTTCATCACAGAAATCTGACTTCTCTTATTGGCTATTGCAATGAAGGAGACAATATAGGGCTCATTTATGAATATATGGCAAATGGAAACCTTGATGAACTTCTGTCGGGAAAAAATAACAAGGCAAAGTTCTTGACTTGGGAAGACAGACTCAGAATAGCAGTGGATGCAGCCCAAGGATTGGAATATTTGCACAATGGTTGTAAGCCACCTATAATCCACAGAGATGTGAAAAGTACAAACATTTTATTAAACGAAAGCTTCCAAGCAAAATTGGCTGATTTTGGCCTATCCAAAAACTTTCCCACTGATGGAGGCAGCCATTTGTCCACTATTGTTGCTGGAACTCTGGGTTACCTAGATCCTGAGTACATGACATCAAACAGGTTGACAGAGAAAAGTGATGTTTACAGCTTCGGAGTTGTTCTTTTGGAGATAGTCACAAGCCAAGCAGCCATAATAAAATCACCTGACAAGACTCACATAAGTCAGTGGGTTAGATCCATGCTTTATAATGGGGATATAGAGAATATTGTTGACTCAAGATTACAACAAAATTTTGACACTAACTCTGCTTGGAAAGCTGTTGAGATAGGAATAGCTTGTGTGTCCCTTAATTCTTCCAATAGGCCAAACATGAATGAAGTAGTGCACGAGCTAAAGGAGTGTTTGGCTGCAGAATTAGCCAGAAAAAGGGATGGTCGTTGTAAAGCTAAAAAGGGAGGTTCAATTGAGTTGATTCCGCTCAATCTGACAATTGAACTCAGTCCCCAAGCTAGGTAG 2343 0.3764 MGMFLYFLLLLLCVLNTVLIQAQDDQSGFISIDCGRPDHLNYSDKITTINYTSDANFRNTGVSKRLLGNSEKLSQQLEYLRSFPNGVRNCYRINVISGTKYLIRAFFYYGNYDNLNQPPQFDLHFGANVWGTVKLTDLSSIITSEIIYTPSLDYIQPCLVNIGKGTPFISAIELRPLSNTAYVIDSTNSVLSSVYRYDSGSITNSGYRYKDDVYDRIWEPFKFNNFNNLNSSFSLDSLVQNGYIYIPPIVMSTAVTPVNPESSIDIIWKSHNKYDQYYLYMHFSEVEKLAENEAREFNIKVNGKFWHGPVRPVYQEVTTVSSPSALTGAKRYEISLSKTETSTLPPILNAFEIYKVKDFSQSEGSLSNSLDPNLCEPASCNQKKGDQKKKKNNITIHVASVAVILVPLVLASAAAIIFFLHKRKLQAAANNHVQSNTPNDSQLESKQRQNESQLESKQRQYTYDEVDEITNNLNRILGRGGFGTVYYGLIDDIEVAVKMLSKSSVQGYQQFLAEVKLLMRVHHRNLTSLIGYCNEGDNIGLIYEYMANGNLDELLSGKNNKAKFLTWEDRLRIAVDAAQGLEYLHNGCKPPIIHRDVKSTNILLNESFQAKLADFGLSKNFPTDGGSHLSTIVAGTLGYLDPEYMTSNRLTEKSDVYSFGVVLLEIVTSQAAIIKSPDKTHISQWVRSMLYNGDIENIVDSRLQQNFDTNSAWKAVEIGIACVSLNSSNRPNMNEVVHELKECLAAELARKRDGRCKAKKGGSIELIPLNLTIELSPQAR 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00502 780 CDD STKc_IRAK 477 742 - -
Trre15g00502 780 ProSitePatterns Serine/Threonine protein kinases active-site signature. 592 604 IPR008271 GO:0004672|GO:0006468
Trre15g00502 780 FunFam Leucine-rich repeat receptor-like protein kinase 448 545 - -
Trre15g00502 780 ProSitePatterns Protein kinases ATP-binding region signature. 477 498 IPR017441 GO:0005524
Trre15g00502 780 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 546 752 - -
Trre15g00502 780 Pfam Malectin-like domain 32 356 IPR024788 -
Trre15g00502 780 MobiDBLite consensus disorder prediction 432 460 - -
Trre15g00502 780 SMART serkin_6 471 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g00502 780 PANTHER OS07G0107800 PROTEIN-RELATED 381 744 - -
Trre15g00502 780 MobiDBLite consensus disorder prediction 366 389 - -
Trre15g00502 780 Gene3D Phosphorylase Kinase; domain 1 452 545 - -
Trre15g00502 780 SUPERFAMILY Protein kinase-like (PK-like) 452 740 IPR011009 -
Trre15g00502 780 Pfam Protein tyrosine and serine/threonine kinase 473 740 IPR001245 GO:0004672|GO:0006468
Trre15g00502 780 Gene3D Transferase(Phosphotransferase) domain 1 546 760 - -
Trre15g00502 780 MobiDBLite consensus disorder prediction 432 449 - -
Trre15g00502 780 ProSiteProfiles Protein kinase domain profile. 471 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00502 Trre-Chr15 3594093 3599671 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00502 384 780 Receptor kinase-like Gene Family AT1G51890 53.149 3.48e-138 419
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Trre15g00502 Malectin_like 6.5e-103 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00502 - - cic:CICLE_v10025053mg 633.639