Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00495 ATGAAGCAAACAATAATAATGAATTTTCTTTCTGTATTGCTTGTTGTCCTCCTAACTATTTTGGGTTTGATAAAGGCTCAAGATCATTCAGGATTCATTAGCTTAGATTGTGGCTTACCTGTAGATTCGTGCTATTCTGCGGTGATTACAGGCATAAATTACATTTCAGATGCTAAATTCATAGATACTGGTGTAAGTAAGAGGGTAAAACGTATAGACAATATTATAGTGACCGGTGATCGAGTACAAGAATATGTGAGGATCTTTCCTAATGGAGTGAGAAATTGTTACAAAATTAATGTAACAAGTGGTGCTAAATATTTAATCAGAGCTATTTTCGGTTATGGTAACTATGATAATCTAAATAAGCCACCACAATTTGATCTTCATCTTGGGGCTAATTTTTGGGATACAGTGAAGTTCACCGATACATCATCAGAATACGGAGCGTCTGAGATCATTTACACTCCATCACTAAATTACATACAACTATGTCTTGTTAACATTGGCAAAGGAACTCCACTCATTTCAGCTATAGAACTGAGACCTTTGAACAATACAGCTTATGAAACAAACTCAGCGAAATCAGCATTATCAGTCTATGGGAGGTTCGGTTTAGGTTCCAACACAGGCTTAAGGTGCAGTGATGATGTTTATGACCGCTTCTGGATGCAATATGAATTATCCAGTGAATGGAGACGATTAAGCACCTCTGTTAACAATGTAAATCTATCAATTCCGAATCCTTTTAAACCACCTGCAACTATAATGAGCACTGCGGTTACACCAGTAAATGCCAGTACCCCTTTACATTTTGAATGGGAAGCAGATAATGTAAATGATCAATACTACTTATACATACACTTATATGACTTCCAAGAGCGGGAAGCCAATGAAACTAGAGCGTTCAATATCACACTGAATGGCATGTATCTTGGTGGACCTATGGTGCTTAGATACCGGGATGAAAATATCTTTGGAAGTTATAATGCCTTACCTTTGACTGGAAGCACAAGGTATCAACTTTCCCTTTCCAAAATAGAGAATTCAATCCTTCCACCCATCATCAATGCCATTGAAGTTTATAAAGTTCAAGACTTCTCACAATCAGAAACGGAACAAAATGATGTTGATGCTATCACAAACATCAAGAAGGCTTATAAGGTGGCTCGGAATTGGCAAGGAGATCCATGTGCCCCTGTGAAATACATGTGGGAAGGCCTAAAATGCAGTATGGATGGCAATAACATACCAAGAATCACATCCTTGAACTTATCTTCAAGTGGACTGACAGGGAAGATAGCATCTTCCATCTCGAAGCTCACTATGTTAGAACACTTGGATTTGTCAAACAATAGCTTAAATGGTCCCATACCTGATTTTCTGATACAACTGCATTCACTAAAAGTCTTAAATGTAGGGAAGAACAAACTTACAGGGTTAGTTCCAAGTGGACTGCTTGAGAGATCAAAAACTAAATCACTGTCACTTAGCGTGGACGGTAACTCTGGTCTTTGTATGGCGAAATCCTGCAGAAATCAGAGTTCGCATGTACCACTAATTGCTTCGATTTCAGCAATAACTGTTGTAATCCTCTTGATTTCTCTTGGATTTTGGATATTCAGAAGACAAAAAGTTACATCCACAACTTCTAAGAAAAGGGGTTCATTGGAATCAAATCACCAAGCATTCAGTTACACTGAAATTCTAAATATTACTGATAACTTCAAAACTATTATTGGAGAAGGAGGATTTGGAAAAGTTTATCTTGGTGTTCTGCAAAATCGCAACCAAGTTGCGGTTAAGATACTCTCACCATCCTCAATGCAAGGTTATAAGGAATTTCAATCAGAGGCACAACTTCTAATGATCGTTCATCATAGAAATTTGGTCTCTCTCATTGGATATTGCGATGAAGATGAAATCAAAGCATTGTTGTATGAATACATGGCCAATGGAAATCTCCAACAACATCTATCAGTGAAAAATACAAATATCTTAAAATGGAGTGAGAGACTTAACATTGCAGTTGATTCAGCTCACGGATTGGATTATCTGCATAATGGATGTAAACCACCTATTATGCATAGAGATTTGAAGCCTTCCAATATATTACTAGACGAAAACATGCATGCCAAGATTGCAGATTTTGGTCTAAGTAGAGTTTTTGGTGATGATATTGATTCTCATATATCCACGCGCCCTGCCGGTACATTTGGTTATGTTGATCCTGAATATCAGAGAACAGGAAACACAAATAAGAAAAATGATGTCTACAGCTTTGGGATAGTTCTATTTGTGTTGATCACTGGTCGTCAAGCAATAGTAAGAGCAGCTGGACAAAACATTCACATACTTGAATGGGTTATTCCTATAATTGAAGCGGGAGATATTCAAAATGTCGTTGATTCAAAGTTAGAGGGTGAATTCAGCATCGATTCAGCACGGAAAGTTATAGAGATAGCCATGTCATGCACTTCACCAAAAGCAGTTGAAAGGCCAGATATAAGCCAAATATTAGCAGAGTTAAAGGAATGCCTATCTTTGGATATGGTTCAGAGAAACCGTGGAAACACAAGAGCTATAGATGAATTGGTTTCTATAGCTACTGTATCAGATACCACTATTTCAGCTAGATAA 2640 0.3742 MKQTIIMNFLSVLLVVLLTILGLIKAQDHSGFISLDCGLPVDSCYSAVITGINYISDAKFIDTGVSKRVKRIDNIIVTGDRVQEYVRIFPNGVRNCYKINVTSGAKYLIRAIFGYGNYDNLNKPPQFDLHLGANFWDTVKFTDTSSEYGASEIIYTPSLNYIQLCLVNIGKGTPLISAIELRPLNNTAYETNSAKSALSVYGRFGLGSNTGLRCSDDVYDRFWMQYELSSEWRRLSTSVNNVNLSIPNPFKPPATIMSTAVTPVNASTPLHFEWEADNVNDQYYLYIHLYDFQEREANETRAFNITLNGMYLGGPMVLRYRDENIFGSYNALPLTGSTRYQLSLSKIENSILPPIINAIEVYKVQDFSQSETEQNDVDAITNIKKAYKVARNWQGDPCAPVKYMWEGLKCSMDGNNIPRITSLNLSSSGLTGKIASSISKLTMLEHLDLSNNSLNGPIPDFLIQLHSLKVLNVGKNKLTGLVPSGLLERSKTKSLSLSVDGNSGLCMAKSCRNQSSHVPLIASISAITVVILLISLGFWIFRRQKVTSTTSKKRGSLESNHQAFSYTEILNITDNFKTIIGEGGFGKVYLGVLQNRNQVAVKILSPSSMQGYKEFQSEAQLLMIVHHRNLVSLIGYCDEDEIKALLYEYMANGNLQQHLSVKNTNILKWSERLNIAVDSAHGLDYLHNGCKPPIMHRDLKPSNILLDENMHAKIADFGLSRVFGDDIDSHISTRPAGTFGYVDPEYQRTGNTNKKNDVYSFGIVLFVLITGRQAIVRAAGQNIHILEWVIPIIEAGDIQNVVDSKLEGEFSIDSARKVIEIAMSCTSPKAVERPDISQILAELKECLSLDMVQRNRGNTRAIDELVSIATVSDTTISAR 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00495 879 PANTHER OS07G0107800 PROTEIN-RELATED 33 847 - -
Trre15g00495 879 ProSitePatterns Serine/Threonine protein kinases active-site signature. 694 706 IPR008271 GO:0004672|GO:0006468
Trre15g00495 879 FunFam Leucine-rich repeat receptor-like protein kinase 549 649 - -
Trre15g00495 879 SUPERFAMILY Protein kinase-like (PK-like) 556 843 IPR011009 -
Trre15g00495 879 ProSiteProfiles Protein kinase domain profile. 574 847 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g00495 879 Pfam Malectin-like domain 35 364 IPR024788 -
Trre15g00495 879 SMART serkin_6 574 847 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g00495 879 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 650 856 - -
Trre15g00495 879 Pfam Protein tyrosine and serine/threonine kinase 576 843 IPR001245 GO:0004672|GO:0006468
Trre15g00495 879 ProSitePatterns Protein kinases ATP-binding region signature. 580 602 IPR017441 GO:0005524
Trre15g00495 879 SUPERFAMILY L domain-like 383 507 - -
Trre15g00495 879 FunFam Leucine-rich repeat receptor-like kinase 375 508 - -
Trre15g00495 879 Gene3D Phosphorylase Kinase; domain 1 555 649 - -
Trre15g00495 879 Gene3D Ribonuclease Inhibitor 374 531 IPR032675 -
Trre15g00495 879 Pfam Leucine Rich Repeat 444 460 IPR001611 GO:0005515
Trre15g00495 879 Gene3D Transferase(Phosphotransferase) domain 1 650 866 - -
Trre15g00495 879 CDD STKc_IRAK 580 845 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00495 Trre-Chr15 3522619 3527276 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00495 8 848 Receptor kinase-like Gene Family AT2G19210 44.148 0.0 714
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Trre15g00495 Malectin_like 1.2e-99 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00495 - - mtr:25500366 1130.16