Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00494 ATGTTACTGAATTTTCTTTTGGTGTTGCTTATTGTCCTTACTATTTTGGTTTTGGTACAAGCTCAGGATCATTCAGGAAACTATTATGGAAACTATTTAATTAGAGCTTCATTTTATTATGGAAACTATGATAATCTAAATGATCCACCAATATTTGATCTTCATTTTGGAGCTAATCTGTGGGATACAGTGAAGTTCAGCAATAATGTATCGTTCTTCCAAATCAGGGAGATCATTTACACTCCACGGCATGATTATATACAACCATGTCTTGTTAACACAGGCCAAGGGACTCCATTCGTTTCAGCTATAGAATTAAGAACTTTGAACAATAAAACTTATGTTACAAAATCAGCTAAATCAGTTTTATCGCTCTTGGTGCGATGGAATATGGGTTCCATCACCAATTCAGGATACAGGTACAAAGATGATATTCATGACCGCATCTGGTCGCCTTCTTTATTTCTAAGTGATTGGAGACGATTAAGCACCACACTTAAGAATGATGATCTAGGTAAGGAAGATTATGAACTACCAGCAATTGTGATGAGCACTGCTGTTACACCAGTAAATGTCAGTGCCCCTATACTATTTTATTGGGATGCAGATGATGTAAATGATCAATACTACCTCTACACACACTTTAATGAGGTTGAGAAACTCGCTGCAAATGAAACTAGAGCGTTCAATATCAAAGTGAATGGAGATCTTTTGTATGGACCTGTGGTACCTATATACCGGAAAGCAATTACCATAATTAGTAAAATAGCTTTGACTGAAGCTTTAGTTTATCAAATTACTCTTTCTAGGACAAATAATTCAACCCTTCCACCAATCCTCAATGCCATTGAGGTTTATAAATTAAAAGACTTCTCACATTCAGAAACTCAACAAGATGAAGTTGATACTATCATAAATATCAAGAATGCTTATGGGATGACTAGAAATTGGCAAGGAGATCCATGTGCCCCTGAGAATTACATATGGGAAGGCTTAAAGTGTAGTGTTGATGGAAATAACATCTCAAGAATCACATCATTGGATTTGTCTTCAAGTGGATTGACAGGGAAGATAGCATCTTCCATCTCAAAGCTTACTATGTTACAGTACTTGGAATTATCAAACAATAGCTTAAATGGTCCCTTACCTGATTTTCTGATACAACTGCATTCACTAAAAGTCTTAAACGTGAGGAAGAACAAACTTATAGGGTTAGTTCCAAGTGAACTCCTTGAGAGATCAAAAACTGGTTCACTATTACTGAGCGTGGATGATAATCCTGGTCTTTGTACGACAAAATCCTGTGGAAAGAAGAGTTTGTTTATACCATTGATTGCATTGTTTTCAGCATTAATTGTTGTAATCCTCTTTGTTTGTCTTGGATTTTGGATATTCAGAAGACATAAAGTTCCATCTAGAAATTCTAAGAAAAGGGGATCACTGGAAACAAAACATCAGGCATTCAGTTACACTGAAATTCTCAATATTACTGATAACTTCAAAACTATTGTTGGAGAAGGTGGATTTGGAAAAGTTTATGTCGGAGTTCTACAAAATCACACCCAAGTTGCGGTTAAGATACTTTCACCATCCTCAATGCAAGGTTATAAGGAATTTCAATCAGAGGCACAACTTCTAATGATTGTACATCATAGACATTTGGTCTCTCTCATTGGCTATTGTGATGAAGATGAAATCAAAGCATTGGTTTATGAATACATGGCCAATGGAAATCTCCAACAACACTTATCAGTGAAAAATACAAATATCTTAAAATGGAATGAGAGGCTTAACATTGCAATTGATGCAGCACACGGATTGGATTATCTGCATAATGGATGTAAACCACCAATTATGCATAGAGATTTGAAGCCTTCCAATATATTACTAGATGAAAACATACATGCCAAGATTGCTGATTTTGGTCTAAGTAGAGCATTTGGTGATGATATTGATTCTCATATATCAACGCGCCCTGCCGGTACACTTGGTTACGTGGCTCCTGAATTTCAGAGAACAGGAAACACAAATAAAAAAAATGATGTGTATAGCTTTGGGATAGTTCTATTTGTGTTGATCACTGGTCGTCAAGCAATAGTAAGAGCAAATGGAGAAAACATTAACATACTTGAATGGGTTATTCCCATAATCGAAGGAGGAGATATTGAAAATGTTGTTGATCCAAGGTTGCAAGGTGAATTTAGCATCAATTCAGCATGGAAAGTTGTAGAGATTGCCATGTCTTGCACTTCACCAAATGCAGTTGGAAGACCAGACACGAGCGTAATATTAGCAGAGTTAAAGGAATGTCTATCTTTGGACATTATTCAAAGAAACTATGGAAGCACAAAAGCTATAGATGAATTGGTTTCTTTTGCTACTATATCAGAAACCACAATTTCAGCTAGATAA 2412 0.359 MLLNFLLVLLIVLTILVLVQAQDHSGNYYGNYLIRASFYYGNYDNLNDPPIFDLHFGANLWDTVKFSNNVSFFQIREIIYTPRHDYIQPCLVNTGQGTPFVSAIELRTLNNKTYVTKSAKSVLSLLVRWNMGSITNSGYRYKDDIHDRIWSPSLFLSDWRRLSTTLKNDDLGKEDYELPAIVMSTAVTPVNVSAPILFYWDADDVNDQYYLYTHFNEVEKLAANETRAFNIKVNGDLLYGPVVPIYRKAITIISKIALTEALVYQITLSRTNNSTLPPILNAIEVYKLKDFSHSETQQDEVDTIINIKNAYGMTRNWQGDPCAPENYIWEGLKCSVDGNNISRITSLDLSSSGLTGKIASSISKLTMLQYLELSNNSLNGPLPDFLIQLHSLKVLNVRKNKLIGLVPSELLERSKTGSLLLSVDDNPGLCTTKSCGKKSLFIPLIALFSALIVVILFVCLGFWIFRRHKVPSRNSKKRGSLETKHQAFSYTEILNITDNFKTIVGEGGFGKVYVGVLQNHTQVAVKILSPSSMQGYKEFQSEAQLLMIVHHRHLVSLIGYCDEDEIKALVYEYMANGNLQQHLSVKNTNILKWNERLNIAIDAAHGLDYLHNGCKPPIMHRDLKPSNILLDENIHAKIADFGLSRAFGDDIDSHISTRPAGTLGYVAPEFQRTGNTNKKNDVYSFGIVLFVLITGRQAIVRANGENINILEWVIPIIEGGDIENVVDPRLQGEFSINSAWKVVEIAMSCTSPNAVGRPDTSVILAELKECLSLDIIQRNYGSTKAIDELVSFATISETTISAR 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00494 803 ProSitePatterns Protein kinases ATP-binding region signature. 504 526 IPR017441 GO:0005524
Trre15g00494 803 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672|GO:0006468
Trre15g00494 803 ProSiteProfiles Protein kinase domain profile. 498 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g00494 803 SUPERFAMILY L domain-like 326 416 - -
Trre15g00494 803 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 574 779 - -
Trre15g00494 803 PANTHER OS07G0107800 PROTEIN-RELATED 29 771 - -
Trre15g00494 803 Gene3D Transferase(Phosphotransferase) domain 1 574 784 - -
Trre15g00494 803 SMART serkin_6 498 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g00494 803 CDD STKc_IRAK 504 769 - -
Trre15g00494 803 Pfam Malectin-like domain 31 287 IPR024788 -
Trre15g00494 803 Gene3D Phosphorylase Kinase; domain 1 479 573 - -
Trre15g00494 803 FunFam Leucine-rich repeat receptor-like protein kinase 476 573 - -
Trre15g00494 803 Pfam Protein tyrosine and serine/threonine kinase 500 758 IPR001245 GO:0004672|GO:0006468
Trre15g00494 803 SUPERFAMILY Protein kinase-like (PK-like) 480 767 IPR011009 -
Trre15g00494 803 Gene3D Ribonuclease Inhibitor 302 419 IPR032675 -
Trre15g00494 803 FunFam Leucine-rich repeat receptor-like kinase 299 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00494 Trre-Chr15 3515944 3519617 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00494 32 787 Receptor kinase-like Gene Family AT2G19210 44.256 0.0 655
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Trre15g00494 PK_Tyr_Ser-Thr 5.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00494 - - mtr:25500366 1093.95