Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00493 ATGAAGGAAACAATAATATTGATGAGAATGTTACTGAATTTTCTTTTGGTGTTGCTTATTGTCCTTACTATTTTGGTTTTGGTACAAGCTCAGGATCATTCAGGAAACTATTATGGAAACTATTTAATTAGAGCTTCATTTTATTATGGAAACTATGATAATCTAAATGATCCACCAATATTTGATCTTCATTTTGGAGCTAATCTGTGGGATACAGTGAAGTTCAGCAATAATGTATCGTTCTTCCAAATCAGGGAGATCATTTACACTCCACGGCATGATTATATACAACCATGTCTTGTTAACACAGGCCAAGGGACTCCATTCGTTTCAGCTATAGAATTAAGAACTTTGAACAATAAAACTTATGTTACAAAATCAGCTAAATCAGTTTTATCGCTCTTGGTGCGATGGAATATGGGTTCCATCACCAATTCAGGATACAGGTACAAAGATGATATTCATGACCGCATCTGGTCGCCTTCTTTATTTCTAAGTGATTGGAGACGATTAAGCACCACACTTAAGAATGATGATCTAGGTAAGGAAGATTATGAACTACCAGCAATTGTGATGAGCACTGCTGTTACACCAGTAAATGTCAGTGCCCCTATACTATTTTATTGGGATGCAGATGATGTAAATGATCAATACTACCTCTACACACACTTTAATGAGGTTGAGAAACTCGCTGCAAATGAAACTAGAGCGTTCAATATCAAAGTGAATGGAGATCTTTTGTATGGACCTGTGGTACCTATATACCGGAAAGCAATTACCATAATTAGTAAAATAGCTTTGACTGAAGCTTTAGTTTATCAAATTACTCTTTCTAGGACAAATAATTCAACCCTTCCACCAATCCTCAATGCCATTGAGGTTTATAAATTAAAAGACTTCTCACATTCAGAAACTCAACAAGATGAAGTTGATACTATCATAAATATCAAGAATGCTTATGGGATGACTAGAAATTGGCAAGGAGATCCATGTGCCCCTGAGAATTACATATGGGAAGGCTTAAAGTGTAGTGTTGATGGAAATAACATCTCAAGAATCACATCATTGGATTTGTCTTCAAGTGGATTGACAGGGAAGATAGCATCTTCCATCTCAAAGCTTACTATGTTACAGTACTTGGAATTATCAAACAATAGCTTAAATGGTCCCTTACCTGATTTTCTGATACAACTGCATTCACTAAAAGTCTTAAACGTGAGGAAGAACAAACTTATAGGGTTAGTTCCAAGTGAACTCCTTGAGAGATCAAAAACTGGTTCACTATTACTGAGCGTGGATGATAATCCTGGTCTTTGTACGACAAAATCCTGTGGAAAGAAGAGTTTGTTTATACCATTGATTGCATTGTTTTCAGCATTAATTGTTGTAATCCTCTTTGTTTGTCTTGGATTTTGGATATTCAGAAGACATAAAGTTCCATCTAGAAATTCTAAGAAAAGGGGATCACTGGAAACAAAACATCAGGCATTCAGTTACACTGAAATTCTCAATATTACTGATAACTTCAAAACTATTGTTGGAGAAGGTGGATTTGGAAAAGTTTATGTCGGAGTTCTACAAAATCACACCCAAGTTGCGGTTAAGATACTTTCACCATCCTCAATGCAAGGTTATAAGGAATTTCAATCAGAGGCACAACTTCTAATGATTGTACATCATAGACATTTGGTCTCTCTCATTGGCTATTGTGATGAAGATGAAATCAAAGCATTGGTTTATGAATACATGGCCAATGGAAATCTCCAACAACACTTATCAGTGAAAAATACAAATATCTTAAAATGGAATGAGAGGCTTAACATTGCAATTGATGCAGCACACGGATTGGATTATCTGCATAATGGATGTAAACCACCAATTATGCATAGAGATTTGAAGCCTTCCAATATATTACTAGATGAAAACATACATGCCAAGATTGCTGATTTTGGTCTAAGTAGAGCATTTGGTGATGATATTGATTCTCATATATCAACGCGCCCTGCCGGTACACTTGGTTACGTGGCTCCTGAATTTCAGAGAACAGGAAACACAAATAAAAAAAATGATGTGTATAGCTTTGGGATAGTTCTATTTGTGTTGATCACTGGTCGTCAAGCAATAGTAAGAGCAAATGGAGAAAACATTAACATACTTGAATGGGTTATTCCCATAATCGAAGGAGGAGATATTGAAAATGTTGTTGATCCAAGGTTGCAAGGTGAATTTAGCATCAATTCAGCATGGAAAGTTGTAGAGATTGCCATGTCTTGCACTTCACCAAATGCAGTTGGAAGACCAGACACGAGCGTAATATTAGCAGAGTTAAAGGAATGTCTATCTTTGGACATTATTCAAAGAAACTATGGAAGCACAAAAGCTATAGATGAATTGGTTTCTTTTGCTACTATATCAGAAACCACAATTTCAGCTAGATAA 2439 0.3579 MKETIILMRMLLNFLLVLLIVLTILVLVQAQDHSGNYYGNYLIRASFYYGNYDNLNDPPIFDLHFGANLWDTVKFSNNVSFFQIREIIYTPRHDYIQPCLVNTGQGTPFVSAIELRTLNNKTYVTKSAKSVLSLLVRWNMGSITNSGYRYKDDIHDRIWSPSLFLSDWRRLSTTLKNDDLGKEDYELPAIVMSTAVTPVNVSAPILFYWDADDVNDQYYLYTHFNEVEKLAANETRAFNIKVNGDLLYGPVVPIYRKAITIISKIALTEALVYQITLSRTNNSTLPPILNAIEVYKLKDFSHSETQQDEVDTIINIKNAYGMTRNWQGDPCAPENYIWEGLKCSVDGNNISRITSLDLSSSGLTGKIASSISKLTMLQYLELSNNSLNGPLPDFLIQLHSLKVLNVRKNKLIGLVPSELLERSKTGSLLLSVDDNPGLCTTKSCGKKSLFIPLIALFSALIVVILFVCLGFWIFRRHKVPSRNSKKRGSLETKHQAFSYTEILNITDNFKTIVGEGGFGKVYVGVLQNHTQVAVKILSPSSMQGYKEFQSEAQLLMIVHHRHLVSLIGYCDEDEIKALVYEYMANGNLQQHLSVKNTNILKWNERLNIAIDAAHGLDYLHNGCKPPIMHRDLKPSNILLDENIHAKIADFGLSRAFGDDIDSHISTRPAGTLGYVAPEFQRTGNTNKKNDVYSFGIVLFVLITGRQAIVRANGENINILEWVIPIIEGGDIENVVDPRLQGEFSINSAWKVVEIAMSCTSPNAVGRPDTSVILAELKECLSLDIIQRNYGSTKAIDELVSFATISETTISAR 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00493 812 SUPERFAMILY Protein kinase-like (PK-like) 489 776 IPR011009 -
Trre15g00493 812 Gene3D Transferase(Phosphotransferase) domain 1 583 793 - -
Trre15g00493 812 ProSitePatterns Protein kinases ATP-binding region signature. 513 535 IPR017441 GO:0005524
Trre15g00493 812 FunFam Leucine-rich repeat receptor-like protein kinase 485 582 - -
Trre15g00493 812 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 583 788 - -
Trre15g00493 812 Pfam Malectin-like domain 40 296 IPR024788 -
Trre15g00493 812 ProSiteProfiles Protein kinase domain profile. 507 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g00493 812 SUPERFAMILY L domain-like 335 425 - -
Trre15g00493 812 ProSitePatterns Serine/Threonine protein kinases active-site signature. 627 639 IPR008271 GO:0004672|GO:0006468
Trre15g00493 812 Gene3D Phosphorylase Kinase; domain 1 488 582 - -
Trre15g00493 812 CDD STKc_IRAK 513 778 - -
Trre15g00493 812 Pfam Protein tyrosine and serine/threonine kinase 509 767 IPR001245 GO:0004672|GO:0006468
Trre15g00493 812 FunFam Leucine-rich repeat receptor-like kinase 308 441 - -
Trre15g00493 812 PANTHER OS07G0107800 PROTEIN-RELATED 38 780 - -
Trre15g00493 812 Gene3D Ribonuclease Inhibitor 311 428 IPR032675 -
Trre15g00493 812 SMART serkin_6 507 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00493 Trre-Chr15 3515944 3519644 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00493 41 796 Receptor kinase-like Gene Family AT2G19210 44.256 0.0 655
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Trre15g00493 PK_Tyr_Ser-Thr 5.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00493 - - mtr:25500366 1093.95