Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00492 ATGAAGCAAACAATGATGGGAATGTTACTGCATTTTCTTTCAGTATTGCTTGGTGTCCTTACTGTTTTGGATTTGATACAGGGTCAGGATCAATCAGGATTCACTAGCATAGATTGTGGCCTACCTGATAATTCGGACTACACTGAGAAAATCACAGGCATAAATTACATATCAGATGCCAAATTCATTGATACAGGTGTAAGTAAGAGCATATCAGCTGCAGAGATGATTACTCATCAACAACAATTAGATTTTGTAAGGAGCTTTCCTAGTGGAGTGAGAAACTGCTACAGAGTAAATGTAAACATTGGTATTCAATATTTAGTAAGAGCTACTTTCTATTATGGAAACTATGATGGTCTAAATAAGCCACCACAATTTGAACTTCATTTTGGAGTTAATGTGTGGGATACAGTGAAGTTCTCTAATGCATCACGCACGGTAATGAGTGAGATAATTTACATTCCATCACAAGATTACATGCAACCATGTCTTGTTAATATAGGCAAAGGGACTCCATTCATTTCAGCTATAGAATTGAGGACTTTGAACAATAACTCTTATGTAACAGATGCAGACTTAGATAAACCAGTATTATCACTCTTCAGGAGATATGATTTAGGTTCCATCACAGACTTAGAATACAGGTACAAAGATGATGTTTATGACCGCATTTGGTTGCCTTATGAATTATCCAGTGATTGGAGACGATTAAACATCTCACTAAACAATGATGATTTACTTCAAAATCGTTATAAACCTCCATCAATTGTGTTGAACACTGCTGTTACACCAGTAAATGTCAGTGCCCCTTTACATTTTGAATGGGATGCCGATAATGTAAATGACCAATACTATGTCTACATACACATATATGATTTTGAAGAACCAGCAGCCAATGAAATTAGGGAGTTCAATATTACAGTGAATGGAAAGTTTTTGTATGGACCCGAGAGACCAAGATACCCGGTAGCAAATACCGTATATAGTACATTAGCTTTAACCCCAACAGCCAAAAGGTATCATGTTACCCTTTCTAAGACAGAGAATTCAACCCTTCCACCCATCCTCAATGCCATTGAGGTTTACAAAGTTAAAGACTTCTCACAATCTGAAACTCAACATGATGATGTTGATACTGTCACAAACATCAAGAATGCCTATGGGGTGGCTAGAAATTGGCAAGGAGATCCATGTGTTCCTGCGAAGTATACGTGGGAAGGCCTAAATTGCAGTTTTAATGGCTTAAATTCCCCAAGAATCATATCTTTGAATTTGTCTTCAAGTGGACTGACAGGGCAGATACATTATTCCATATCACAGCTCACTATGTTACAATACTTGGATTTATCAAACAATAGCTTAAATGGCCCCTTACCGGTTTTTCTGAACAAATTGAAATCACTAAAAGTCTTAAACGTCGGTAAGAATAAACTTACAGGATTAGTTCCAATTGAACTCCTTGAGAGATCTAAAACTGGTTCACTATCACTTAGTGTGGATGATAATCCTGGTCTTCGTACTACGGAATCCAGCACAAACAAGAATTTATCTATACCGTTGATTGCATCGTTTTCAGCACTAAATGTTGTAATCCTCTTGATTTCTCTTGGATTTTGGATATTTAGAAGGCAGAGAGTTTTATCTACAAATTGTAAGGAAAAGGGTGCTATGAAATTAAGACATCAAGCATTCAGTTACATTGAAATTCTCAGTATTACTGATAACTTCAAAACTATTATTGGAGAAGGAGGATTTGGAAAAGTTTATCTTGGTGTTTTAAAAGATCACACCCAAGTTGCGGTTAAGATACTTTCGCCATCCTCAATGCAAGGTTATAAGGAATTTCAATCAGAGGCACAACTTCTATTGATCGTTCATCATAGAAATTTGGTCTCTCTGATTGGATTTTGTGACGAAGGTGAAACCAAAGCATTGATTTATGAATACATGGCCAATGGAAATCTCCAACACTATTTGGTGGAAAATACAAATATCTTAAAATGGAATGAAAGACTTAATATTGCAGTTGATGCAGCACGCGGATTGGATTATCTGCACAATGGATGTAAACCACCTATTATGCATAGAGATTTGAAACCTTCCAATATATTACTAGATGAAAACATGGATGCCAAGATTTCTGATTTTGGTTTAAGTAGAGCTTTTGGTAGTGATATTGATACTCATATATCCACGCGTCCTGCCGGTACACTTGGCTATGCTGATCCTGAATATCAGAGAACAGGGAATACAAATAAAAAAAATGATGTCTACAGTTTTGGGATAGTTTTGTTTGTATTGATCACGGGTCGTCAAGCAATAGTAAGAACATCAGGAGAAAATATTCACATACTTGAATGGGTTATGGCTATAATCAAAGGAGGAAATATTCAAAATGTCGTTGATTCAAAGTTAGAGGGTGAATTCAACATCGATTCAGCACGGAAAGTTGTTGAGATAGCCATGTCATGCATTTCACCAATTGTCGCCGAAAGGCCAGACATTAGCCAAATATTTGCAGAACTGAAAGAGAGTTTATCTTTGGAGATGGTTCAGAGAGACGGAGAAAGAGAAAACAATGTAATTGAATGGAACTCATCACAATTCCAATCAATAACCGCTCCTTTTCCTAGATAA 2640 0.3652 MKQTMMGMLLHFLSVLLGVLTVLDLIQGQDQSGFTSIDCGLPDNSDYTEKITGINYISDAKFIDTGVSKSISAAEMITHQQQLDFVRSFPSGVRNCYRVNVNIGIQYLVRATFYYGNYDGLNKPPQFELHFGVNVWDTVKFSNASRTVMSEIIYIPSQDYMQPCLVNIGKGTPFISAIELRTLNNNSYVTDADLDKPVLSLFRRYDLGSITDLEYRYKDDVYDRIWLPYELSSDWRRLNISLNNDDLLQNRYKPPSIVLNTAVTPVNVSAPLHFEWDADNVNDQYYVYIHIYDFEEPAANEIREFNITVNGKFLYGPERPRYPVANTVYSTLALTPTAKRYHVTLSKTENSTLPPILNAIEVYKVKDFSQSETQHDDVDTVTNIKNAYGVARNWQGDPCVPAKYTWEGLNCSFNGLNSPRIISLNLSSSGLTGQIHYSISQLTMLQYLDLSNNSLNGPLPVFLNKLKSLKVLNVGKNKLTGLVPIELLERSKTGSLSLSVDDNPGLRTTESSTNKNLSIPLIASFSALNVVILLISLGFWIFRRQRVLSTNCKEKGAMKLRHQAFSYIEILSITDNFKTIIGEGGFGKVYLGVLKDHTQVAVKILSPSSMQGYKEFQSEAQLLLIVHHRNLVSLIGFCDEGETKALIYEYMANGNLQHYLVENTNILKWNERLNIAVDAARGLDYLHNGCKPPIMHRDLKPSNILLDENMDAKISDFGLSRAFGSDIDTHISTRPAGTLGYADPEYQRTGNTNKKNDVYSFGIVLFVLITGRQAIVRTSGENIHILEWVMAIIKGGNIQNVVDSKLEGEFNIDSARKVVEIAMSCISPIVAERPDISQIFAELKESLSLEMVQRDGERENNVIEWNSSQFQSITAPFPR 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00492 879 ProSitePatterns Serine/Threonine protein kinases active-site signature. 694 706 IPR008271 GO:0004672|GO:0006468
Trre15g00492 879 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 651 855 - -
Trre15g00492 879 FunFam Leucine-rich repeat receptor-like protein kinase 551 650 - -
Trre15g00492 879 SMART serkin_6 575 852 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g00492 879 FunFam Leucine-rich repeat receptor-like kinase 376 509 - -
Trre15g00492 879 PANTHER OS07G0107800 PROTEIN-RELATED 35 847 - -
Trre15g00492 879 SUPERFAMILY L domain-like 375 536 - -
Trre15g00492 879 ProSiteProfiles Protein kinase domain profile. 575 847 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g00492 879 Gene3D Ribonuclease Inhibitor 378 501 IPR032675 -
Trre15g00492 879 Pfam Protein tyrosine and serine/threonine kinase 577 843 IPR001245 GO:0004672|GO:0006468
Trre15g00492 879 ProSitePatterns Protein kinases ATP-binding region signature. 581 603 IPR017441 GO:0005524
Trre15g00492 879 SUPERFAMILY Protein kinase-like (PK-like) 560 843 IPR011009 -
Trre15g00492 879 Gene3D Phosphorylase Kinase; domain 1 556 650 - -
Trre15g00492 879 Gene3D Transferase(Phosphotransferase) domain 1 651 869 - -
Trre15g00492 879 CDD STKc_IRAK 581 845 - -
Trre15g00492 879 Pfam Malectin-like domain 37 365 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00492 Trre-Chr15 3510403 3514444 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00492 25 848 Receptor kinase-like Gene Family AT2G19210 45.943 0.0 742
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Trre15g00492 Malectin_like 1.3e-109 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00492 - - mtr:25500366 1132.47