Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00491 ATGTTATATCTCATTTTGGATCGAAGATTTGAGGTGGATCAATCCATTGAGGCTCCAGCTCTTGGTCCACCGGAATGCGACTCTATAGCTGTATATATAAATGCTTCCTTGTATACCATTAGCATTCATCATTCAATAATTTTTGTATCCGTGATGAAGCAAACAATGATGGGAATGTTACTGCATTTTCTTTCAGTATTGCTTGGTGTCCTTACTGTTTTGGATTTGATACAGGGTCAGGATCAATCAGGATTCACTAGCATAGATTGTGGCCTACCTGATAATTCGGACTACACTGAGAAAATCACAGGCATAAATTACATATCAGATGCCAAATTCATTGATACAGGTGTAAGTAAGAGCATATCAGCTGCAGAGATGATTACTCATCAACAACAATTAGATTTTGTAAGGAGCTTTCCTAGTGGAGTGAGAAACTGCTACAGAGTAAATGTAAACATTGGTATTCAATATTTAGTAAGAGCTACTTTCTATTATGGAAACTATGATGGTCTAAATAAGCCACCACAATTTGAACTTCATTTTGGAGTTAATGTGTGGGATACAGTGAAGTTCTCTAATGCATCACGCACGGTAATGAGTGAGATAATTTACATTCCATCACAAGATTACATGCAACCATGTCTTGTTAATATAGGCAAAGGGACTCCATTCATTTCAGCTATAGAATTGAGGACTTTGAACAATAACTCTTATGTAACAGATGCAGACTTAGATAAACCAGTATTATCACTCTTCAGGAGATATGATTTAGGTTCCATCACAGACTTAGAATACAGGTACAAAGATGATGTTTATGACCGCATTTGGTTGCCTTATGAATTATCCAGTGATTGGAGACGATTAAACATCTCACTAAACAATGATGATTTACTTCAAAATCGTTATAAACCTCCATCAATTGTGTTGAACACTGCTGTTACACCAGTAAATGTCAGTGCCCCTTTACATTTTGAATGGGATGCCGATAATGTAAATGACCAATACTATGTCTACATACACATATATGATTTTGAAGAACCAGCAGCCAATGAAATTAGGGAGTTCAATATTACAGTGAATGGAAAGTTTTTGTATGGACCCGAGAGACCAAGATACCCGGTAGCAAATACCGTATATAGTACATTAGCTTTAACCCCAACAGCCAAAAGGTATCATGTTACCCTTTCTAAGACAGAGAATTCAACCCTTCCACCCATCCTCAATGCCATTGAGGTTTACAAAGTTAAAGACTTCTCACAATCTGAAACTCAACATGATGATGTTGATACTGTCACAAACATCAAGAATGCCTATGGGGTGGCTAGAAATTGGCAAGGAGATCCATGTGTTCCTGCGAAGTATACGTGGGAAGGCCTAAATTGCAGTTTTAATGGCTTAAATTCCCCAAGAATCATATCTTTGAATTTGTCTTCAAGTGGACTGACAGGGCAGATACATTATTCCATATCACAGCTCACTATGTTACAATACTTGGATTTATCAAACAATAGCTTAAATGGCCCCTTACCGGTTTTTCTGAACAAATTGAAATCACTAAAAGTCTTAAACGTCGGTAAGAATAAACTTACAGGATTAGTTCCAATTGAACTCCTTGAGAGATCTAAAACTGGTTCACTATCACTTAGTGTGGATGATAATCCTGGTCTTCGTACTACGGAATCCAGCACAAACAAGAATTTATCTATACCGTTGATTGCATCGTTTTCAGCACTAAATGTTGTAATCCTCTTGATTTCTCTTGGATTTTGGATATTTAGAAGGCAGAGAGTTTTATCTACAAATTGTAAGGAAAAGGGTGCTATGAAATTAAGACATCAAGCATTCAGTTACATTGAAATTCTCAGTATTACTGATAACTTCAAAACTATTATTGGAGAAGGAGGATTTGGAAAAGTTTATCTTGGTGTTTTAAAAGATCACACCCAAGTTGCGGTTAAGATACTTTCGCCATCCTCAATGCAAGGTTATAAGGAATTTCAATCAGAGGCACAACTTCTATTGATCGTTCATCATAGAAATTTGGTCTCTCTGATTGGATTTTGTGACGAAGGTGAAACCAAAGCATTGATTTATGAATACATGGCCAATGGAAATCTCCAACACTATTTGGTGGAAAATACAAATATCTTAAAATGGAATGAAAGACTTAATATTGCAGTTGATGCAGCACGCGGATTGGATTATCTGCACAATGGATGTAAACCACCTATTATGCATAGAGATTTGAAACCTTCCAATATATTACTAGATGAAAACATGGATGCCAAGATTTCTGATTTTGGTTTAAGTAGAGCTTTTGGTAGTGATATTGATACTCATATATCCACGCGTCCTGCCGGTACACTTGGCTATGCTGATCCTGAATATCAGAGAACAGGGAATACAAATAAAAAAAATGATGTCTACAGTTTTGGGATAGTTTTGTTTGTATTGATCACGGGTCGTCAAGCAATAGTAAGAACATCAGGAGAAAATATTCACATACTTGAATGGGTTATGGCTATAATCAAAGGAGGAAATATTCAAAATGTCGTTGATTCAAAGTTAGAGGGTGAATTCAACATCGATTCAGCACGGAAAGTTGTTGAGATAGCCATGTCATGCATTTCACCAATTGTCGCCGAAAGGCCAGACATTAGCCAAATATTTGCAGAACTGAAAGAGAGTTTATCTTTGGAGATGGTTCAGAGAGACGGAGAAAGAGAAAACAATGTAATTGAATGGAACTCATCACAATTCCAATCAATAACCGCTCCTTTTCCTAGATAA 2793 0.3659 MLYLILDRRFEVDQSIEAPALGPPECDSIAVYINASLYTISIHHSIIFVSVMKQTMMGMLLHFLSVLLGVLTVLDLIQGQDQSGFTSIDCGLPDNSDYTEKITGINYISDAKFIDTGVSKSISAAEMITHQQQLDFVRSFPSGVRNCYRVNVNIGIQYLVRATFYYGNYDGLNKPPQFELHFGVNVWDTVKFSNASRTVMSEIIYIPSQDYMQPCLVNIGKGTPFISAIELRTLNNNSYVTDADLDKPVLSLFRRYDLGSITDLEYRYKDDVYDRIWLPYELSSDWRRLNISLNNDDLLQNRYKPPSIVLNTAVTPVNVSAPLHFEWDADNVNDQYYVYIHIYDFEEPAANEIREFNITVNGKFLYGPERPRYPVANTVYSTLALTPTAKRYHVTLSKTENSTLPPILNAIEVYKVKDFSQSETQHDDVDTVTNIKNAYGVARNWQGDPCVPAKYTWEGLNCSFNGLNSPRIISLNLSSSGLTGQIHYSISQLTMLQYLDLSNNSLNGPLPVFLNKLKSLKVLNVGKNKLTGLVPIELLERSKTGSLSLSVDDNPGLRTTESSTNKNLSIPLIASFSALNVVILLISLGFWIFRRQRVLSTNCKEKGAMKLRHQAFSYIEILSITDNFKTIIGEGGFGKVYLGVLKDHTQVAVKILSPSSMQGYKEFQSEAQLLLIVHHRNLVSLIGFCDEGETKALIYEYMANGNLQHYLVENTNILKWNERLNIAVDAARGLDYLHNGCKPPIMHRDLKPSNILLDENMDAKISDFGLSRAFGSDIDTHISTRPAGTLGYADPEYQRTGNTNKKNDVYSFGIVLFVLITGRQAIVRTSGENIHILEWVMAIIKGGNIQNVVDSKLEGEFNIDSARKVVEIAMSCISPIVAERPDISQIFAELKESLSLEMVQRDGERENNVIEWNSSQFQSITAPFPR 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00491 930 CDD STKc_IRAK 632 896 - -
Trre15g00491 930 Pfam Protein tyrosine and serine/threonine kinase 628 894 IPR001245 GO:0004672|GO:0006468
Trre15g00491 930 Gene3D Ribonuclease Inhibitor 429 552 IPR032675 -
Trre15g00491 930 ProSitePatterns Protein kinases ATP-binding region signature. 632 654 IPR017441 GO:0005524
Trre15g00491 930 Pfam Malectin-like domain 88 416 IPR024788 -
Trre15g00491 930 ProSiteProfiles Protein kinase domain profile. 626 898 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g00491 930 SUPERFAMILY L domain-like 426 587 - -
Trre15g00491 930 FunFam Leucine-rich repeat receptor-like protein kinase 602 701 - -
Trre15g00491 930 SUPERFAMILY Protein kinase-like (PK-like) 611 894 IPR011009 -
Trre15g00491 930 Gene3D Phosphorylase Kinase; domain 1 607 701 - -
Trre15g00491 930 Gene3D Transferase(Phosphotransferase) domain 1 702 920 - -
Trre15g00491 930 SMART serkin_6 626 903 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g00491 930 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 702 906 - -
Trre15g00491 930 PANTHER OS07G0107800 PROTEIN-RELATED 86 898 - -
Trre15g00491 930 ProSitePatterns Serine/Threonine protein kinases active-site signature. 745 757 IPR008271 GO:0004672|GO:0006468
Trre15g00491 930 FunFam Leucine-rich repeat receptor-like kinase 427 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00491 Trre-Chr15 3510403 3514597 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00491 76 899 Receptor kinase-like Gene Family AT2G19210 45.943 0.0 743
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Trre15g00491 Malectin_like 1.5e-109 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00491 - - mtr:25500366 1132.47