Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00490 ATGTATAACTGCAAGCTTCCACCATCATGCTTCTCTAACAGAACAATACCTCCGAGTCCAACATCAATAGCTGGAGACCGGCAATCCGCCGCCAATCTTCAACCCCTCTCCGACCACCGCCGTCGACCTAGACTACATCATCTTCATATATACTTTAAAGATAATTGTTTCTTTCTTTCTTCTTCTTGTTTAATTGATAACATGGAAAGAGAGTCACCACGGATTGTGACCTTAATGTTAATCGCGTGCGTATGGTTTGTCTCGGTGCCATTTATTTGCATCAGTCAAGCCAATAATTTAGAACAACTCGACAAGTCTGTTTCAAGAGAAATTGCAAACAATGAAAATCCAGGTTTTATAAGCATCGATTGTGGATCAAAAACTGATTTGTTAGACGATAGTGGAATTCGGTATACAACAGATAAAGGATTTGTGGAAACAGGAGAGAATCATCAGACTTCACCAAATAGCAACTTTCTTGATGATTATCGGCAATCCCATATTGGGAAACAATTGACCACATTAAGATGTTTTCCAGAAGGATATAGAAACTGCTACACGTTGAAACCAAAAGAGGGAAAAGATAATAGATATCTCATCAGGGCTTTCTTTTCATATGGTAATTATGATGGCAAAAATGAAACCCAATCTTTTGAACTGCATGTTGGAGTCAATCTTTGGAAAAAAGTTAATTATACAACTGCTACTGATTATCTTGTTATGGAGATAATTCACACTTCTTCAACTGACACTATAAATGTGTGCCTTATAAAGACTCATTCCACAATCCCATGTATTTCTACATTGGAATTGAGACTTTTGAACAATTCAATTTATCAGACTAATCAAGAGATAATTTCCACCAATGGCAATACTCCACTACCTCTTCTGAATTTGCAAATTAGGTTCTCCAGGTATAATGACGACATATATGATCGGATATGGAGGTGCAATTATGAGGACAAGGATTGGCTTCCGTCTAGTTTGGAAGAATCAATAAATATGGATCTCGAAACCAATAATGATGCATATAAATTGCCGGCCCAAGCATTGAGGAGTGCAGCCCAACCGCAGAAGAATATTTCATACATGACATTTACCTATGATGACGAGTTTATACCCCTAGACAAAAATTATGAGTATAATGTTTACTTTCACTTTATGGAAATTGAGAAACTTTCAGATGGCAAAAAAAGAAAAATAAATATCACCCTCAACTCCCAAAATGTACTATCTCAGCCTTTAATTCTTGATTACTTGAAGCCTGTTACACTCAACTTCACAACTCAACCTGGCGTTTCGTTTAACATTAGCGCAACCTCGGATTCTGATGCTCCTCCTTTACTCAATACCTTCGAGATCTATCAATTGGTGAACCAACTTGATTCGCCAACAGAGGCTCAAGATGTTGCTGCAATCATGGATATCAAAAGGTACTACGAAATCAACAAATTAAGCTGGCAAGGAGACCCTTGTCTTCCTAAGCTATATGCATGGGAAGACCTAATTTGCAACGCCATTCCAAGGATCACATCTTTGAACCTGAGCTCAAGCAAACTAAGAGGGGGGATCAATATTTCGTTCTCATATCTCACGGAACTAGAATTGTTGGATTTGTCACACAATGAGTTGGAAGGACATTTGCCTGAATTTCTGGCACAAATGCCAAAGTTAAGAGTTCTTAATCTGACGGGAAACAAGCTTTCGGGTCCAATTCCGAATGCTCTCAAGCAAATGGCAGAAGGATCTTTGCAACTAAGTGTGGATGGCAATCCTGGTATTTGTATGACGGGTTCATGCAAAAAGAAGAACATCAGTGTGCCACTTGTTGCATCACTTTCGGCATTAGTTGTTACCATTTTGATCTTCCTAGGATTTTGGATATTCAAAAGACGAAAAGCGGTGCTTTCAAATTCTAAGATGAAATCAAAACATCAAGCATTCAGTTACACTGAACTTGTCAATATTACTGATAACTTCAAAACTATTATTGGAGAAGGAGGATTTGGAAAAGTTTACTTAGGCACACTACAAGATCAAACTCAAGTAGCTGTTAAGATGCTTTCACCATCGTCAATGCAAGGTTATAGAGAATTTCAATCTGAGGCACAACTTCTAACGGTTGTTCATCATAGAAATTTGGTCTCTCTTATTGGATATTGTGATGAAGGTGAAGTCAAAGCATTGATTTATGAGTACATGGCGAATGGAAATCTCCAAGAACATCTATCAGAGGAAAAACAAGATATCTTAAGTTGGAATGGGAGACTTAAAATTGCAGTTGATGCTGCACATGGATTGGAGTATCTGCATAATGGATGTAAACCACCTATTATGCATAGAGATTTGAAGCCAGCCAACATACTACTAGATGAGAACTTGCAAGCAAAGATTGCTGACTTTGGTCTAAGTAGAGCTTTTGGTAACGACAATGATTCTCATATATCCACACGCCCTGCTGGTACATTTGGTTACGTTGATCCAGAATTTCAAAGAACAGGAAACACAACCAAGAAGAATGATATCTACAGCTTCGGGATAATTCTATTTGTTTTGATTACCGGAAAGAAAGCAGTAGTAAAAGTATCTGAAGAACACATTCACATACTTCAATGGGTTATTCCCATTATTAAAGGAGGAGATATTCAAAACATTGTTGATTCGAGGTTGCAGGGTGAATTCAGCATCAATTCAGCATGGAACATTGTTGAGATAGCCATGTCATGCATTTCACAAAATGCGGTTGAAAGGCCGGACATTAGTCAAATATTGGTAGAGCTAAATGAATGTCTATCTTTGGATATGGTTCGGAGCAATAGTGAAAGCGCAAGAGATATAATTGAAATGACTTATTTATCTGTTGAATCAGACACTACTCCATTAGCTAGGTAA 2892 0.3779 MYNCKLPPSCFSNRTIPPSPTSIAGDRQSAANLQPLSDHRRRPRLHHLHIYFKDNCFFLSSSCLIDNMERESPRIVTLMLIACVWFVSVPFICISQANNLEQLDKSVSREIANNENPGFISIDCGSKTDLLDDSGIRYTTDKGFVETGENHQTSPNSNFLDDYRQSHIGKQLTTLRCFPEGYRNCYTLKPKEGKDNRYLIRAFFSYGNYDGKNETQSFELHVGVNLWKKVNYTTATDYLVMEIIHTSSTDTINVCLIKTHSTIPCISTLELRLLNNSIYQTNQEIISTNGNTPLPLLNLQIRFSRYNDDIYDRIWRCNYEDKDWLPSSLEESINMDLETNNDAYKLPAQALRSAAQPQKNISYMTFTYDDEFIPLDKNYEYNVYFHFMEIEKLSDGKKRKINITLNSQNVLSQPLILDYLKPVTLNFTTQPGVSFNISATSDSDAPPLLNTFEIYQLVNQLDSPTEAQDVAAIMDIKRYYEINKLSWQGDPCLPKLYAWEDLICNAIPRITSLNLSSSKLRGGINISFSYLTELELLDLSHNELEGHLPEFLAQMPKLRVLNLTGNKLSGPIPNALKQMAEGSLQLSVDGNPGICMTGSCKKKNISVPLVASLSALVVTILIFLGFWIFKRRKAVLSNSKMKSKHQAFSYTELVNITDNFKTIIGEGGFGKVYLGTLQDQTQVAVKMLSPSSMQGYREFQSEAQLLTVVHHRNLVSLIGYCDEGEVKALIYEYMANGNLQEHLSEEKQDILSWNGRLKIAVDAAHGLEYLHNGCKPPIMHRDLKPANILLDENLQAKIADFGLSRAFGNDNDSHISTRPAGTFGYVDPEFQRTGNTTKKNDIYSFGIILFVLITGKKAVVKVSEEHIHILQWVIPIIKGGDIQNIVDSRLQGEFSINSAWNIVEIAMSCISQNAVERPDISQILVELNECLSLDMVRSNSESARDIIEMTYLSVESDTTPLAR 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00490 963 Gene3D Phosphorylase Kinase; domain 1 639 733 - -
Trre15g00490 963 SUPERFAMILY L domain-like 486 579 - -
Trre15g00490 963 SUPERFAMILY Protein kinase-like (PK-like) 637 927 IPR011009 -
Trre15g00490 963 Pfam Protein tyrosine and serine/threonine kinase 660 926 IPR001245 GO:0004672|GO:0006468
Trre15g00490 963 Pfam Leucine rich repeat 508 568 IPR001611 GO:0005515
Trre15g00490 963 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 734 940 - -
Trre15g00490 963 ProSiteProfiles Protein kinase domain profile. 658 931 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g00490 963 Gene3D Transferase(Phosphotransferase) domain 1 734 951 - -
Trre15g00490 963 FunFam Leucine-rich repeat receptor-like kinase 468 597 - -
Trre15g00490 963 CDD STKc_IRAK 664 929 - -
Trre15g00490 963 FunFam Leucine-rich repeat receptor-like protein kinase 636 733 - -
Trre15g00490 963 PANTHER OS07G0107800 PROTEIN-RELATED 120 935 - -
Trre15g00490 963 Pfam Malectin-like domain 122 456 IPR024788 -
Trre15g00490 963 Gene3D - 305 457 - -
Trre15g00490 963 Gene3D Ribonuclease Inhibitor 470 594 IPR032675 -
Trre15g00490 963 ProSitePatterns Serine/Threonine protein kinases active-site signature. 778 790 IPR008271 GO:0004672|GO:0006468
Trre15g00490 963 ProSitePatterns Protein kinases ATP-binding region signature. 664 686 IPR017441 GO:0005524
Trre15g00490 963 SMART serkin_6 658 931 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00490 Trre-Chr15 3489834 3506700 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00490 75 963 Receptor kinase-like Gene Family AT2G19210 39.631 0.0 646
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Trre15g00490 Malectin_like 1.1e-75 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00490 - - mtr:25500358 1207.59