Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00477 ATGAAGCAAACAATAATGATGAGAATGTTACAGCATTTTCTTTCAGTATTGTTTGGTGTCTTTACTAGTATTTTGGTTTTGATACAAGCTCAAGATCAATCAGGATTCATAAGCTTGGATTGTGGTCTACCTGAAGATGTGAGCTATTCTTCATCGGAGACAGGCATAAATTACATTTCAGATGCAAAATTCATAGATACAGGTGTAAGTAAGAGGGTACAAGGCAATATTAATATTAAACAGCAACTAGAATATGTGAGGAGTTTTCCAATTGGAGTGAGAAATTGTTACAAAATAAATGTAACAAGTGGTACTAAATATTTAATCAGAACTTTATTCTACTATGGAAACTATGATAATCAAAATAAGCCACCACAATTTGATCTTCATGTTGGAGCTAATATGTGGGATACAGTGAAGTTCACCAATTTATCACGCATCGCAATCAATGAGATAATTTACATTCCATCACAAGATTACATACAACTATGTCTTGTTAACACTGGCAAAGGGACTCCATTCATTTCAGCTATAGAACTGAGGCCTTTGAACAATGATGCTTATGTCACACAAGCTAAATCAGTATTATTAGCATTCTTAAGATTGGATGTTGGTTCCATCTCAAAATCAGACTACAGGTACAAAGATGATGTTTGTGACCGCGAATGGTTTCCTTTTAAATTCTCCGATGATATGAAAAGATTAAACACATCACTTAAAAATGATGATCTAGGTCAGGAAGATTATGAACTACCAGCAAGTGTAATGAGCACTGCTGGTACACCAGTAAATGTCAGTGCCCCTTTACAAACACTTTGGAATGCAGATAATGTAAATGACCAGTACTACCTCTACTTGCACTTTAATGAGGTTGAAGAGTTAGCAGCAAATGAAACTAGAGCTTTCAATATCACAGTGAATGGAGATTTTTTGTATGGACTTGAGATACCTATATACCAGAAAGCAAGTACCATATTTAGTAAAACACCTTTGACTGGAGCCACAAGCTATGAACTTTCCCTTACTAAGACACAGAATTCAACTCTTCCGCCCATCCTTAATGCCATTGAGGTTTATAAACTAAAGGATTTCTCACAATCTGAAACTCAACAGAATGATGTTGATACTATTACAAACATCAAGAATGCATATGGGGTGGCTAGGAATTGGCAAGGAGATCCATGTGCTCCTGTGAAATATATGTGGGAAGGCTTAAACTGCAGTATTGATGATGGCAACAACCCTCCAAGAATCACATCTTTGAATTTGTCATCAAGTGGATTGACAGGAGAGATAGCATCTGCCATATCAAAGCTCACAAAGTTACAATACTTGGATTTATCAAACAATAGCTTAAATGGTCCCTTACCTGATTTTCTGTTACAACTGCATTCACTAAAAGTCTTAAAAGTGGGGAAGAACAAACTCACAGGGTTAGTTCCAAGTGGACTTCATGAGCGATCAAAATCCGGTTCACTATCATTGAGCGTGGATGATAATTCTGGTCTTTGTATGACGAAATCCTGCAAAAAGAAGAGTTTGCTTGTACCACTAATTGCATCAATTGCAGCATTAATTTTTGTAATCCTCTTGATTTCTCTTACATTATGGATATTCAAAAGACAAAAAGTTAAGTCTACAAATTCTAAGAAAAGGGGTTCATTTGAATCAAAACATCAAGCATTCAGTTATACTGAAGTTCTCAATATTACTGATAACTTCAAAACTATTATTGGAGAAGGAGGATTTGGAAAAGTTTATGTTGGTATTCTACAAAATCACACGCAAGTTGCGGTTAAGATACTTTCACCATCCTCAATGCAAGGTTATAAAGAATTTCAATTAGAGGCACAACTTCTAATGATTGTTCATCATAGAAATTTGGTCTCTCTCATTGGATATTGTGATGACGGTGAAATCAAAGCATTGATTTATGAATACATGGCCAAAGGAAATCTCCATCAACACTTATTAGTGAAAAATAAAAATATCTTAACATGGAATGAGAGGCTTAACATTGCAGTTGATGCCGCACACGGATTGGATTATCTGCATAATGGATGTAAACCACCTATTATGCATAGAGATTTGAAACCTTCCAACATATTACTAGATGATAACATGCATGCCAAAATTGCTGATTTTGGTCTAAGTAGAACTTTTGCTAATGATGTTGATTCTCATATATCCACACGCCCTGCCGGTACATTTGGTTACGCTGATCCTGAATTTATGAGAACAGGAAAGACAAATATACAAAATGATGTGTACAGCTTTGGCATAGTTCTATTTGTGTTGATCACTGGTCGTCAAGCAATAGTAAGAGAAGATGAAAAAAACATTCACATACTTGAATGGGTTATTCCTATAATCGAAGAAGGAGATATTCAAAATGTTATCGATCCAAAGTTGCAGGGTGAATTTAGCATTAATTCAGCATGGAAAGCTATAGAGATTGCCATGTCTTGCACTTCACCAAATGCAGTTGTAAGGCCAGATGCTCACCAAATATTGGCAGAGTTAAAGGAATGTTTGTCTTTGGATATGGTTCAGAGAAACTGTGGAAACACAAGTGCTATAGATGGATTGGTTTCTGTAGCTACTGTATCTGAAACCATTATTTTAGCTAGATAA 2634 0.3557 MKQTIMMRMLQHFLSVLFGVFTSILVLIQAQDQSGFISLDCGLPEDVSYSSSETGINYISDAKFIDTGVSKRVQGNINIKQQLEYVRSFPIGVRNCYKINVTSGTKYLIRTLFYYGNYDNQNKPPQFDLHVGANMWDTVKFTNLSRIAINEIIYIPSQDYIQLCLVNTGKGTPFISAIELRPLNNDAYVTQAKSVLLAFLRLDVGSISKSDYRYKDDVCDREWFPFKFSDDMKRLNTSLKNDDLGQEDYELPASVMSTAGTPVNVSAPLQTLWNADNVNDQYYLYLHFNEVEELAANETRAFNITVNGDFLYGLEIPIYQKASTIFSKTPLTGATSYELSLTKTQNSTLPPILNAIEVYKLKDFSQSETQQNDVDTITNIKNAYGVARNWQGDPCAPVKYMWEGLNCSIDDGNNPPRITSLNLSSSGLTGEIASAISKLTKLQYLDLSNNSLNGPLPDFLLQLHSLKVLKVGKNKLTGLVPSGLHERSKSGSLSLSVDDNSGLCMTKSCKKKSLLVPLIASIAALIFVILLISLTLWIFKRQKVKSTNSKKRGSFESKHQAFSYTEVLNITDNFKTIIGEGGFGKVYVGILQNHTQVAVKILSPSSMQGYKEFQLEAQLLMIVHHRNLVSLIGYCDDGEIKALIYEYMAKGNLHQHLLVKNKNILTWNERLNIAVDAAHGLDYLHNGCKPPIMHRDLKPSNILLDDNMHAKIADFGLSRTFANDVDSHISTRPAGTFGYADPEFMRTGKTNIQNDVYSFGIVLFVLITGRQAIVREDEKNIHILEWVIPIIEEGDIQNVIDPKLQGEFSINSAWKAIEIAMSCTSPNAVVRPDAHQILAELKECLSLDMVQRNCGNTSAIDGLVSVATVSETIILAR 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00477 877 Pfam Protein tyrosine and serine/threonine kinase 574 839 IPR001245 GO:0004672|GO:0006468
Trre15g00477 877 ProSiteProfiles Protein kinase domain profile. 572 845 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g00477 877 Gene3D Transferase(Phosphotransferase) domain 1 648 859 - -
Trre15g00477 877 SUPERFAMILY L domain-like 402 502 - -
Trre15g00477 877 ProSitePatterns Serine/Threonine protein kinases active-site signature. 692 704 IPR008271 GO:0004672|GO:0006468
Trre15g00477 877 Pfam Leucine rich repeat 416 476 IPR001611 GO:0005515
Trre15g00477 877 ProSitePatterns Protein kinases ATP-binding region signature. 578 600 IPR017441 GO:0005524
Trre15g00477 877 Gene3D Ribonuclease Inhibitor 374 497 IPR032675 -
Trre15g00477 877 SUPERFAMILY Protein kinase-like (PK-like) 552 841 IPR011009 -
Trre15g00477 877 Pfam Malectin-like domain 39 360 IPR024788 -
Trre15g00477 877 FunFam Leucine-rich repeat receptor-like protein kinase 548 647 - -
Trre15g00477 877 Gene3D Phosphorylase Kinase; domain 1 553 647 - -
Trre15g00477 877 CDD STKc_IRAK 578 843 - -
Trre15g00477 877 PANTHER OS07G0107800 PROTEIN-RELATED 37 845 - -
Trre15g00477 877 FunFam Leucine-rich repeat receptor-like kinase 372 505 - -
Trre15g00477 877 SMART serkin_6 572 845 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g00477 877 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 648 853 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00477 Trre-Chr15 3410636 3416691 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00477 12 861 Receptor kinase-like Gene Family AT2G19210 45.675 0.0 763
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Trre15g00477 Malectin_like 1.1e-108 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00477 - - mtr:25500366 1196.42