Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00475 ATGAAGCAAACAATGATGGGAATGTTTCTGCATTTTCTTTCGGTATTGCTTGGTGTCCTTACTATTTTGGTTTTGATACAAGCTCAGGATCTATCAGGATTCATTAGCATAGATTGTGGTCTACCTGAGCATTTGAGCTATTCTGATAGGAACACAAGCATAGGTTATATTTCAGATGCCAAATTCATAGATACTGGTGTAAGTAAGAGGTTAGGCAATTCTGAAAAGCTTAGTCAACAGCTGGAATATGTGAGAACTTTTCCTAAGGGAGTGAGAAATTGTTACAGAATAAATGTAACAAGTGGTACTAAATATTTAATCAGAGCTACTTTCTATTATGGTAACTATGATAATCAAAATAATCTCCCACAATTTGATCTTCATCTCGGATCTAATCTATGGGCTAAAGTGAAGTTCCCCAATGCATCGCGCATCATGAGGGGTGAGATCGTTTACACTCCATCACAAGATTACATACAACCATGTCTTGTTAACATTGGCAAAGGGACACCATTCATTTCAGCTATAGAGTTGAGGACTTTGGAGAATAAATTTTATGTCCCATCATCAGCTAAATCAGTATTTTCACTCTTCATGCGATTTGATTCAGGTTCCATTACAAACATAGATTACAGGTACAAAGATGATATTTATGACCGCATTTGGGAGCCTTCTTTTTTATACAGTCATTTAACACAATTAAACACCTCACTTAACAATGATGATCTTCAGAATGATTATGATATACCGGCAATTGTGATGAGCACTGCTGTTACGCCAATTAATGCCAGTGCCCCTTTACAATTCGGATGGCCTGCTAATAGTGGAAATGAACAATACTACGCATATTTGTACTTTACTGAGGTTGAGAAGCTAGAAGAAAATGAAACTAGAGCATTCCATATCACAGTGAATGACAAGTTATGGTATACATCATCAGTGATACCTGAATATCAGTCAGTGCTTAACATAGGTAGTACAGAACCTTTGACTGGAGCCAGAAGTTATATATTTTCCTTTTCTAAGACGGAGAATTCAACCCTTCCACCCATCCTTAACGCCATTGAGGTTTTTAAAGTAAAAGACTTCTCACAATCAGAAACTCAACAAGATGATGTTGATGCTATCACAAAAATCAAGAATGCTTATGGTGTGGCTAGAAATTGGCAAGGTGATCCATGTGGTCCTGTCAAGTATATGTGGGATGGCCTAAACTGTAGTATTGATGATGCCAATAACCCTCCAAGAATCACATCTTTAAATTTGTCTTCAAGTGGATTGACAGGGCAGATATCATCTTCCATATCAAAGCTCACTATGTTACAATCTTTGGATTTATCAAACAATAGCTTAAATGGTCCTATACCAGAATTTTTTATGCAACTGCGGTCACTAAAAGTCATAAACATAGAAAAGAACAACCTTACAGGATCAATTCCAAGTGGACTCCTTGTGAGAAATAAAACAGGTTCACTATCACTAAGTGTGGATGATAACCCTGGTCTTTGTACGACGGAAACATGCAAAAAGAAGAAGAAGAATTTTAAGTCTGTACCAGTTATTGCATCATTTTCAGCATTAATTGTAATCCTCTTGATATCTCTTGGGGTTTGGAGATTCAGAAGACAAAAAGTTACGTCTTCCAATTCGAAGAAAAAGGGTTCAATGAAATCAATACATCAAGCATTCAGTTGCATTGAAATTATCAATATTACTGATAACTTCAAAACTATTATTGGAGAAGGAGGATTTGGGAAAGTTTACTTTGGCACTCTACAAGATCAAACTCGAGTCGCTGTTAAGAGACTTTCACCATCATCAATGCAGGGTTATAAGGAGTTTCAATCAGAGGCACAACTTCTAACGATTGTTCATCATAGAAATTTGGTCTCTCTCATTGGATATTGTGATGAAGGTGAAATCAAAGCATTGGTTTATGAATACATGGCCAATGGAAATCTCCAACAACTCTTATTGGAGGAAAATTCAAATATTTTAAAATGGAATGAGAGACTAAACATTGCAGTTGATGCAGCACACGGACTGGATTATCTGCATAATGGATGTAAACCACCTATTTTGCATAGAGATTTGAAGCCTTCCAACATATTACTAGATGATAACATGCATGCCAAGATAGCAGATTTCGGTCTAAGTAGAGCTTTTGGTAACGATGTTGATTCTCATATATCTACACGCCCTGCTGGTACATTTGGTTACATTGATCCAGAATTCCAGAGAACAGGTAACACAAATAAGACTAATGATATCTATAGCTTTGGGATAATTCTATTTGAGTTAATCACTGGCCAGAAAGCACTAGTAAGAGCATCAGAAGAAACCATTCACATACTTCAATGGGTTACTCCCATAGTTAAGAGTGGAGATATTCAAAACATTGTTGATTCGAGGTTGCAGGGTGAATTCAGCATCAATTCAGCATGGAAAGTTGTAGAGATAGCCATGTCATGCACTTCACCAATTGCAGTTGAAAGACCAGACACAAGCCAAATATTGGCAGAGCTAAAGGACTGTGTATCTTTGGAGATAGTTCAGAGAAATAATGGAAGCGCGGTAATATATGAATTGACTTCTTTATCTATTGGATCAAATACCTCTCCTTTAGCTAGGTAA 2634 0.3675 MKQTMMGMFLHFLSVLLGVLTILVLIQAQDLSGFISIDCGLPEHLSYSDRNTSIGYISDAKFIDTGVSKRLGNSEKLSQQLEYVRTFPKGVRNCYRINVTSGTKYLIRATFYYGNYDNQNNLPQFDLHLGSNLWAKVKFPNASRIMRGEIVYTPSQDYIQPCLVNIGKGTPFISAIELRTLENKFYVPSSAKSVFSLFMRFDSGSITNIDYRYKDDIYDRIWEPSFLYSHLTQLNTSLNNDDLQNDYDIPAIVMSTAVTPINASAPLQFGWPANSGNEQYYAYLYFTEVEKLEENETRAFHITVNDKLWYTSSVIPEYQSVLNIGSTEPLTGARSYIFSFSKTENSTLPPILNAIEVFKVKDFSQSETQQDDVDAITKIKNAYGVARNWQGDPCGPVKYMWDGLNCSIDDANNPPRITSLNLSSSGLTGQISSSISKLTMLQSLDLSNNSLNGPIPEFFMQLRSLKVINIEKNNLTGSIPSGLLVRNKTGSLSLSVDDNPGLCTTETCKKKKKNFKSVPVIASFSALIVILLISLGVWRFRRQKVTSSNSKKKGSMKSIHQAFSCIEIINITDNFKTIIGEGGFGKVYFGTLQDQTRVAVKRLSPSSMQGYKEFQSEAQLLTIVHHRNLVSLIGYCDEGEIKALVYEYMANGNLQQLLLEENSNILKWNERLNIAVDAAHGLDYLHNGCKPPILHRDLKPSNILLDDNMHAKIADFGLSRAFGNDVDSHISTRPAGTFGYIDPEFQRTGNTNKTNDIYSFGIILFELITGQKALVRASEETIHILQWVTPIVKSGDIQNIVDSRLQGEFSINSAWKVVEIAMSCTSPIAVERPDTSQILAELKDCVSLEIVQRNNGSAVIYELTSLSIGSNTSPLAR 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00475 877 FunFam Leucine-rich repeat receptor-like kinase 371 505 - -
Trre15g00475 877 Gene3D Ribonuclease Inhibitor 373 496 IPR032675 -
Trre15g00475 877 Gene3D Phosphorylase Kinase; domain 1 579 649 - -
Trre15g00475 877 SUPERFAMILY Protein kinase-like (PK-like) 555 842 IPR011009 -
Trre15g00475 877 Pfam Leucine rich repeat 415 475 IPR001611 GO:0005515
Trre15g00475 877 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 649 855 - -
Trre15g00475 877 SUPERFAMILY L domain-like 412 495 - -
Trre15g00475 877 Gene3D Transferase(Phosphotransferase) domain 1 650 860 - -
Trre15g00475 877 CDD STKc_IRAK 579 843 - -
Trre15g00475 877 ProSitePatterns Serine/Threonine protein kinases active-site signature. 693 705 IPR008271 GO:0004672|GO:0006468
Trre15g00475 877 SMART serkin_6 573 846 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g00475 877 ProSiteProfiles Protein kinase domain profile. 573 846 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g00475 877 Pfam Malectin-like domain 37 360 IPR024788 -
Trre15g00475 877 ProSitePatterns Protein kinases ATP-binding region signature. 579 601 IPR017441 GO:0005524
Trre15g00475 877 PANTHER OS07G0107800 PROTEIN-RELATED 35 846 - -
Trre15g00475 877 Pfam Protein tyrosine and serine/threonine kinase 575 842 IPR001245 GO:0004672|GO:0006468
Trre15g00475 877 FunFam Leucine-rich repeat receptor-like protein kinase 547 648 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00475 Trre-Chr15 3404378 3408703 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00475 11 877 Receptor kinase-like Gene Family AT2G19210 43.941 0.0 746
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Trre15g00475 Malectin_like 2e-105 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00475 - - mtr:25500366 1102.81