Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00474 ATGAAGCAAACAATAATGATTAGAATGTCACTGCATTTTCTTTCTACATTGCTTGGTGTCCTTTCTATTTTTGTTTTGATTCAAGCTCAAGATCAATCAGGATTCATTAGCTTAGATTGTGGTCTACCCGAAGATGTGAGCTATTCTGCGGTGAAGACAGGCATAAATTACATTTCAGATGCCAAATTCATAGATACTGGTGTAAGTAAGACTATAACACCTATAGACAAAACAAAAGTGCTTAGTGAAGAGCTACTAGAATACGTGAGGAGCTTTCCCAGTGGAGTGAGAAATTGTTACAAAATAAATGTAACAAGTGGTACTAAATATTTAACCAGAACTACTTTCTATTATGGTAACTATGACAATCAAAATAAGCCACCGCAATTTGATCTTCATCTTGGAGCTAATGTATGGGATACAGTGAAATTCACCAATTTATCAAACATCAAAACAAGTGAGATCATTTACATTCCATTACAAGATTACATACAACTATGTCTTGTTAACACTGGCAAAGGGACTCCATTCATTTCAGCAATAGAATTGAGGCCTTTGAACAATGATTCTTATGTTACACAATCAGCTAGATCAGGATTATCAGAATTCTTACGATTGGATATTGGTTCAGTCACAAACTCAGAATACAGGTACAAAGACGATGTTTATGATCGCCTCTGGTTTACTTTTCAACCAGATGATATGAAACAATTAAGCACATCACTTAACAATGATGATCTATTAACTCAGAATATTTATAAACCACCCGCAATTGTGATGAGCACTGCTGCTACACCAGTTAATGCCAGTGCCCCTTTACAAGTATATTGGAATGCAGATAATGTAAATGACCAATACTACCTTTACCTGCACTTTAATGAGGTTGAAAAGTTGGCAGCAAATGAAACTAGAGCATTCAATAGCAAAGTGAATGGAGAGCTTTTATATGGACCTGAGACACCTGCATACCAGTCAGTTGATACAATATTTAGTAAAAGACCTTTCACCGGAGCCACAAGCTATGAAATTACCCTTTCAAAGACAGAGAATTCAACTCATCCACCCATCCTCAATGCCATTGAGGTTTATAAAGTAAAAGACTTCTCACAATCAGAAACTCAACAAGATGAGGTTGATGCTATCACAAACATCAAGAATGCTTATGGGGAGGCTAGAGATTGGCAAGGCGATCCATGTGGTCCTGCAAAGTATATGTGGAAAGGACTAAACTGTAGTATTGATGACAATAACATAACAAGAATCACATCTTTGAATTTGTCTTCAAGTGGGTTGACAGGGCAGATAGAATTTTCCATATCAAAGCTCACTATGTTACAGTACTTGGATTTATCAAACAATAGCTTAAATGGTCCCTTACCTGATTTTCTGCAACAACTGCATTCACTAAAAGTCTTAAACGTCGGGAAGAACAAACTTACAGGGTTAGTTCCAAGTGAACTCCTTGAGAGATCAAAAACTGGTTCACTATCATTGAGTGTGGATGATAATTCTGGTCTTTGCAAGACGAAATCCTGCAGAAAGAAGAGTTCACATGTACCACTGATTGCTTCCATTTCAGCAATAATTGTTGTAATCCTCTTGATTTTTCTAGGATTTTGGATATTCAAAAGACATAAAGTTACGTCTACAAATTCTAAGAAAAGGGGTTCACTGGAATCAAAACATCAAGCATTCAATTACACTGAAATTCTCAATATTACTGATAACTTCAAAACTATTATTGGAGAAGGAGGATTTGGAAAAGTTTACTTTGGCACACTACAAGATCAAACTCAAGTCGCTGTTAAGAGGCTCTCACCTTCATCAGTACAAGGTTATAAGGAATTTCAATCAGAGGCACAACTTCTAACGGTTGTTCATCATAGAAATTTGGTCTCCCTCATTGGATATTGTAATGAAGGTGAAACCAAAGCATTGATTTATGAATACGCGGCCAATGGAAATCTCCAGCAACACCTATTAGGTAATTTATATTTTACCGCTATCGGAAAATCAAAGATCTTAAACTGGAATGAGAGACTGAACATTGCAGTTGATGCAGCACAAGGATTGGATTATATGCATAATGGTTGTAAGCCACCTAATATGCATAGAGATTTGAAACCATCCAACATATTGCTAGATGATAACATGCATGCCAAGATAGCTGACTTTGGTCTAAGTAGAGCTTTTGGTAACGATATTGATTCTCATATATCAACGCGCCCTGCCGGTACATTTGGTTACATTGATCCAGAATTTCAGAGAACAGGAAACACAAATAAGAAAAATGATATCTATAGCTTTGGGATAATTCTATTTGAGTTGATCACTGGCAGAAAAGTACTAGAAAGAGCATCTGGAGAAAACACTCACATACTTCAATGGGTTCTTCCCATAGTTAAAAGAGGAGATATTCAAAATGTTGTTGATCCAAGGTTACAGGGTGAATTTAGCATCAATTCAGCATGGAAAGCTGTAGAGATTGCCATGTCGTGCACTTCCCCATATGTAGATGAAAGGTCAGACATGAGCCAAATATTAGTAGAGTTAAAGGAATGTCTATCTTTGGACATGATTCAGAGAAACTGTGGAAGCACAATAGCTATGGATGAATTGGTTTCTTTAGCTACTGTATCAGAAACCACTATTTTAGCTAGATAA 2664 0.3649 MKQTIMIRMSLHFLSTLLGVLSIFVLIQAQDQSGFISLDCGLPEDVSYSAVKTGINYISDAKFIDTGVSKTITPIDKTKVLSEELLEYVRSFPSGVRNCYKINVTSGTKYLTRTTFYYGNYDNQNKPPQFDLHLGANVWDTVKFTNLSNIKTSEIIYIPLQDYIQLCLVNTGKGTPFISAIELRPLNNDSYVTQSARSGLSEFLRLDIGSVTNSEYRYKDDVYDRLWFTFQPDDMKQLSTSLNNDDLLTQNIYKPPAIVMSTAATPVNASAPLQVYWNADNVNDQYYLYLHFNEVEKLAANETRAFNSKVNGELLYGPETPAYQSVDTIFSKRPFTGATSYEITLSKTENSTHPPILNAIEVYKVKDFSQSETQQDEVDAITNIKNAYGEARDWQGDPCGPAKYMWKGLNCSIDDNNITRITSLNLSSSGLTGQIEFSISKLTMLQYLDLSNNSLNGPLPDFLQQLHSLKVLNVGKNKLTGLVPSELLERSKTGSLSLSVDDNSGLCKTKSCRKKSSHVPLIASISAIIVVILLIFLGFWIFKRHKVTSTNSKKRGSLESKHQAFNYTEILNITDNFKTIIGEGGFGKVYFGTLQDQTQVAVKRLSPSSVQGYKEFQSEAQLLTVVHHRNLVSLIGYCNEGETKALIYEYAANGNLQQHLLGNLYFTAIGKSKILNWNERLNIAVDAAQGLDYMHNGCKPPNMHRDLKPSNILLDDNMHAKIADFGLSRAFGNDIDSHISTRPAGTFGYIDPEFQRTGNTNKKNDIYSFGIILFELITGRKVLERASGENTHILQWVLPIVKRGDIQNVVDPRLQGEFSINSAWKAVEIAMSCTSPYVDERSDMSQILVELKECLSLDMIQRNCGSTIAMDELVSLATVSETTILAR 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00474 887 ProSiteProfiles Protein kinase domain profile. 575 855 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g00474 887 Gene3D Ribonuclease Inhibitor 378 502 IPR032675 -
Trre15g00474 887 FunFam Leucine-rich repeat receptor-like kinase 376 509 - -
Trre15g00474 887 SMART serkin_6 575 855 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g00474 887 ProSitePatterns Protein kinases ATP-binding region signature. 581 603 IPR017441 GO:0005524
Trre15g00474 887 Gene3D Phosphorylase Kinase; domain 1 556 650 - -
Trre15g00474 887 Gene3D Transferase(Phosphotransferase) domain 1 652 867 - -
Trre15g00474 887 FunFam Lectin-domain containing receptor kinase A4.3 651 869 - -
Trre15g00474 887 FunFam Leucine-rich repeat receptor-like protein kinase 551 650 - -
Trre15g00474 887 SUPERFAMILY L domain-like 386 499 - -
Trre15g00474 887 SUPERFAMILY Protein kinase-like (PK-like) 557 851 IPR011009 -
Trre15g00474 887 Pfam Protein tyrosine and serine/threonine kinase 577 848 IPR001245 GO:0004672|GO:0006468
Trre15g00474 887 PANTHER OS07G0107800 PROTEIN-RELATED 36 855 - -
Trre15g00474 887 Pfam Malectin-like domain 38 365 IPR024788 -
Trre15g00474 887 CDD STKc_IRAK 581 853 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00474 Trre-Chr15 3398456 3403404 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00474 14 855 Receptor kinase-like Gene Family AT2G19230 47.245 0.0 762
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Trre15g00474 Malectin_like 1.1e-106 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00474 - - mtr:25500366 1181.01