Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00469 ATGAACATGAATAGCAAAGAAACACTTGTTGTACTTTTAGTGTCTCTCTTATTCTTTTGCAGCTATGCACAAGATACACTTGTACCAGCTATCATAACATTTGGTGACTCTGCTGTGGATGTAGGGAATAATGACTACCTTCCTACTCTTTTTAAGGCTAATTACCCTCCTTATGGTAGAGACTTTGTTAATAAACAACCTACTGGCAGGTTTTGCAATGGCAAATTAGCTACTGATTTTACAGCTGAAACACTTGGTTTTACGACATTTCCACCGGCATATCTTAGTCCACAGGCATCAGGGAAGAACCTCCTTATCGGAGCAAACTTCGCTTCAGCTGCATCTGGTTTTGATGAAAAGGCTGCTACATTGAATCATGCAATTCCATTGTCCCAACAGTTAAATTATTTCAAGGAATATCAAGGCAAGTTGGCTCAGGTTGCTGGCAGTAAAAAAGCTGCATCAATTATCAAGGATTCTTTGTATCTATTGAGTGCTGGCAGCAGTGACTTTCTACAAAATTATTATGTCAATCCTTGGATCAACAAATTAGTCACTGTTGATGAGTATTCAGCTTATCTACTAGACTCATTCAATAGCTTTATTACGGACTTGTATGGATTGGGAGCTAGGAAAATTGGAGTGACTTCACTTCCACCGTTGGGTTGTCTACCTGCTGCAAGGACTTTATTTGGTGCCCATGAGAGTGGTTGTGTCTCAAGAATCAACACCGATATTCAAGGATTTAACAAGAAGGTCAACTCAGCTGCATCAAATCTTCAAAAGCAACATTCTGGTCTTAAGATTGTGATTTTTGATATTTACAAGCCTCTCTATGACCTTGTTCAAAACCCTTCAAGTTCCGGTTTTGCTGAGGCAGGAAGAGGTTGCTGTGGTACAGGAACTGTAGAAACAACATTCTTGTTGTGCAATCAAAAATCACCAGGAACTTGTTCTAATGCAACTCAGTATGTTTTTTGGGACAGTGTTCATCCATCAGAAGCTGCTAATCAAGTTATAGCAGATGCTTTACTTCTACAAGGCATAGCTCTTATCACATAA 1062 0.3927 MNMNSKETLVVLLVSLLFFCSYAQDTLVPAIITFGDSAVDVGNNDYLPTLFKANYPPYGRDFVNKQPTGRFCNGKLATDFTAETLGFTTFPPAYLSPQASGKNLLIGANFASAASGFDEKAATLNHAIPLSQQLNYFKEYQGKLAQVAGSKKAASIIKDSLYLLSAGSSDFLQNYYVNPWINKLVTVDEYSAYLLDSFNSFITDLYGLGARKIGVTSLPPLGCLPAARTLFGAHESGCVSRINTDIQGFNKKVNSAASNLQKQHSGLKIVIFDIYKPLYDLVQNPSSSGFAEAGRGCCGTGTVETTFLLCNQKSPGTCSNATQYVFWDSVHPSEAANQVIADALLLQGIALIT 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00469 353 PANTHER GDSL ESTERASE/LIPASE EXL3 17 344 - -
Trre15g00469 353 SUPERFAMILY SGNH hydrolase 31 344 - -
Trre15g00469 353 Gene3D SGNH hydrolase 19 348 IPR036514 -
Trre15g00469 353 CDD SGNH_plant_lipase_like 29 345 IPR035669 -
Trre15g00469 353 Pfam GDSL-like Lipase/Acylhydrolase 31 344 IPR001087 GO:0016788
Trre15g00469 353 FunFam GDSL esterase/lipase APG 20 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00469 Trre-Chr15 3378534 3380842 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00469 3 345 Pollen Coat Proteome AT1G75910 35.260 1.55e-61 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00469 - - gmx:100815273 592.808