Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00397 ATGCAGTTGGTTTACATTTCTATAACCACTTTGTTGGCATGCTATGTTTTTCTTAACAAATTTGTAAGGAATTTAAATGGATGGTACTATCATCTAAAACTAAGAAACAAAGAGTACCCTTTACCCCCCGGTGATATGGGATGGCCTCTTATTGGCAATCTATTAACATTCTACAAAGATTTGTATTTTGGCAAACCTAATTCACTCATTAACAACTTTATTCTCAAATATGGAAGAAACGGTATCTACAAAGCTCACTTGTTTGGAAATCCTTGTATAATCATTTGTGAACCTGAGATGTGTAGACAAGTGCTTTCTGATGATGTGAACTTTAAGATTGGTTATCCAAAAGCAATCAAAGAGTTGACAAAGTGTAGACCCATGGTCGATGTCTCGGATTCAGAACATAGGCATTTTCGACGCCTAATTACTGCTCCTATTGTTGGTCACAATGCATTAGAAGTGTACCTAGAACGTCTCGAGGACATTATAATCAATTCTTTAGAGGAATTGTCTAGCATGAAACACCCTATTGAGCTCTTGAAAGAGATGAAGAAAGTTTCCTTTAAAATCATTGTCAATATTTTCATGGGATCTTCTAGTGAGAACATTATTAAAAACATTGGAAGTTTATTTACTGACTTGTGTAGTGGCATGCTCTCCATCCCCCTCAATGCACCTGGTTTTACTTTCCACAAAGCACTCAAGTCACGCAAGAAGATAGCCAAAATAATTCAACCTGTTGTGGATGAAAGGAGGTTGATGATAAAAAATGGAGAACATGTAGGAGAGAGAAAAGATCTTATGGATATTCTCTTGGAAATCAAAGATGAGAATGGTAGAAAATTGGAGGATGAAGATATTAGTGACTTATTGATTGGATTTTTATTTGCTGGACATGAAACTACGGCAAATGCAATAATGTGGTCAATTATATATCTTACACAACATCCACATATTATGGAAAAAGCCAAGGTAGAGCAAGAAGATATTTTGAGGACAAGATCAACCTCCCAAAAAAGATTGAGTCTTAATGAAGTCAAACAAATGGTTTATCTTTCTCATGATTACACTGCCAAGGCAGGAACCTTCCTTCCTTTTGGAGCGGGAAGTAGGCTTTGTCCTGGAGCAGACTTGGTCAAACTTGAAATTTGTGTATTTCTTCATTATTTCCTCCTTAATTACAGGTTGGAACGAGTAAATCCAGAGTGTCGTATCACATGCTTGCCGGTACGTAAACCCATTGACAATTGTCTTGCCAAAGTGATAAAGGTGTCGTATGCTTAG 1287 0.3667 MQLVYISITTLLACYVFLNKFVRNLNGWYYHLKLRNKEYPLPPGDMGWPLIGNLLTFYKDLYFGKPNSLINNFILKYGRNGIYKAHLFGNPCIIICEPEMCRQVLSDDVNFKIGYPKAIKELTKCRPMVDVSDSEHRHFRRLITAPIVGHNALEVYLERLEDIIINSLEELSSMKHPIELLKEMKKVSFKIIVNIFMGSSSENIIKNIGSLFTDLCSGMLSIPLNAPGFTFHKALKSRKKIAKIIQPVVDERRLMIKNGEHVGERKDLMDILLEIKDENGRKLEDEDISDLLIGFLFAGHETTANAIMWSIIYLTQHPHIMEKAKVEQEDILRTRSTSQKRLSLNEVKQMVYLSHDYTAKAGTFLPFGAGSRLCPGADLVKLEICVFLHYFLLNYRLERVNPECRITCLPVRKPIDNCLAKVIKVSYA 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00397 428 SUPERFAMILY Cytochrome P450 36 422 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00397 428 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00397 428 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00397 428 PRINTS P450 superfamily signature 365 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00397 428 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 367 376 IPR017972 GO:0005506|GO:0016705
Trre15g00397 428 PANTHER CYTOCHROME P450 26 360 410 - -
Trre15g00397 428 Gene3D Cytochrome P450 32 355 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00397 428 Pfam Cytochrome P450 363 399 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00397 428 Pfam Cytochrome P450 42 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00397 428 Gene3D Cytochrome P450 356 416 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00397 428 PRINTS E-class P450 group I signature 364 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00397 428 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00397 428 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00397 428 PRINTS E-class P450 group I signature 374 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00397 Trre-Chr15 2782029 2786781 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00397 11 422 Cytochrome P450 AT1G05160 38.105 7.36e-113 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00397 K04123 - ag:BAG68929 557.755