Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00395 ATGAAATTTCAATGGTTTTGGATATCTGCTGCCACTTTGTTGGCATGCTACATTTTTGTTAACAAAGTTGTGAGGAATTTGAATGATTGGTATTATAATCTTAAGTTGAGAAAGAGACAATATCCACTACCTCCTGGTCACATGGGATGGCCTTTGATTGGAAACCTTTGGCACTTCTTCAAAGATTTCTCATCTGGTAGCCGTGAGCTATTCACCAACAACATTTTTCTCAGATATGAACGAACCGGTATCTACAAGACTCACTTGTATGGTTGTCCAAGCATTATTGTCACTGCACCTGATATGTGCAAGAAAGTCCTAAATGATGAGGTGACCTTTAAGCTTGGTTATCCAAAAGCCGTCACTGTACTAGCATCAAATAGGGTACTAAGTAGCGAGCATGGACGCCTTAAGCGACTAGTCACGGCTCCTATTGCCGGTTACAATGTATCAACATTGTACCTAGAGCGTATTGAAGATATTGTGATCAACAAGCTAGAAGAACTATCTAGCATGAAACACCCTATTACGTTCCTTGAGGAGATGAGGAAAGTTTCCTTTAAATTCGTCATTCAAATTTTCTTGGGCTCTTGCGATCAAAGTACCGTTAACGAAATTGGAGATTTATTTCATGTCATGAGTAGTGCCTTGTTCTCTTTGATGCCTATAAATGTACCTGGTTTTCTTTTCCACAAAGCACTTAAGGCGCGTAAGAAGTTTGCCAAAATAGTTCAATCTATTATTGATGAAAGGAGAATGATGACAACAAAAAATGGACAAATTGGTGAAAAGAATGATTTATTAAACATTCTTTTGGAAATCAATGATGAAGAAGGTGAAAAATTGGAGGATAAGGACATTATTGACTTGCTGATATCACTTCTATTTGGAGGTCATGATTCAACTGCAGTTGGTATGATGTGGACAATTATGCATCTTACTCAACATCCACATTGTATGAAGAAAGCCAAGGAAGAACAAGAAGAAATAATGAAAGCAAGACCACCTTCGCAAAAACGACTAAGTAATGGGGAAATTAAAAAAATGGTTTATCTTTCTCAGGTTTTTGATGAAACATTACGCCATACCTCGGTCTTTTCACTTTTTCGAGAGGCAACGACTGATGTGAACATCAATGGTTATTTAATTCCAAAGGGATGGAAAGTGTTAGTTTGGCTAAGTGCTATGCATATGATTCCTGAACATCACTCAAATCCAGAAGAATATAATCCATCAAGATGGGATGATTATAACCCTGCAACAGGAACCTTTCTTCCTTTCGGAATAGGTCGGCGGCTTTGTCCAGGAAGAGACTTGGCCAAATATGAAATGACCATATTTTTACATTATTTCATCCTTAATTATAAGTTGGAGCGGATAAATCCAGAGTGTCCATTGACTAGTTTTCCATATGTTATGCCAGTAGACAAATGCTTTGCTAAGGTCATAAAGCTGTCTGATTCTTAA 1467 0.3756 MKFQWFWISAATLLACYIFVNKVVRNLNDWYYNLKLRKRQYPLPPGHMGWPLIGNLWHFFKDFSSGSRELFTNNIFLRYERTGIYKTHLYGCPSIIVTAPDMCKKVLNDEVTFKLGYPKAVTVLASNRVLSSEHGRLKRLVTAPIAGYNVSTLYLERIEDIVINKLEELSSMKHPITFLEEMRKVSFKFVIQIFLGSCDQSTVNEIGDLFHVMSSALFSLMPINVPGFLFHKALKARKKFAKIVQSIIDERRMMTTKNGQIGEKNDLLNILLEINDEEGEKLEDKDIIDLLISLLFGGHDSTAVGMMWTIMHLTQHPHCMKKAKEEQEEIMKARPPSQKRLSNGEIKKMVYLSQVFDETLRHTSVFSLFREATTDVNINGYLIPKGWKVLVWLSAMHMIPEHHSNPEEYNPSRWDDYNPATGTFLPFGIGRRLCPGRDLAKYEMTIFLHYFILNYKLERINPECPLTSFPYVMPVDKCFAKVIKLSDS 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00395 488 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00395 488 PRINTS P450 superfamily signature 434 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00395 488 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00395 488 PRINTS P450 superfamily signature 425 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00395 488 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Trre15g00395 488 SUPERFAMILY Cytochrome P450 37 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00395 488 PRINTS E-class P450 group I signature 434 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00395 488 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00395 488 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00395 488 PRINTS E-class P450 group I signature 424 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00395 488 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00395 488 PANTHER CYTOCHROME P450 26 39 468 - -
Trre15g00395 488 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 427 436 IPR017972 GO:0005506|GO:0016705
Trre15g00395 488 Pfam Cytochrome P450 44 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00395 488 Gene3D Cytochrome P450 33 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00395 Trre-Chr15 2746325 2749065 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00395 13 484 Cytochrome P450 AT2G32440 43.841 2.83e-144 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00395 K04123 - ag:BAG68929 609.372