Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00389 ATGATGGCCTACATACCATTAGGATTAAGTACTTGCACCCAAAATCATCAATCAGAAGTAGCAAGTTACACCAAAACTCAAATTTTTGGAATATTCTTTATTGTTGTTATTGTCTTTGGCCTACTTTTTAGCCTACTACTATCCTTCGGACTCTCGCCTGAGACCACGTTCAACATTGTTGAAGCCTCAATCGTGCATTTTAACATCACAAGCAACAACACTTTATATTATAATTTTAAAGTGACTGTTGCAGCAAAAAACTTTGAAGATGATATAAAATCTTATGATAAGGTCACTGCAATTGCTTCATATAAAGGTAATCAATTAGCTTCGGTGAAAATGGCACCTTTTAAGTTAAGTGGTAAGAATATTGTTAGGCTTGAACCCATAGTGTTTGAAGGGAATAATGTGATGACATTTGAACCTCAACAACTTGCTAAGTATAACAAAGAGACACAGTTGGGGATTTACAACTTAGATATGGACTTAGATTTGGACTACTTTAGAAATCATATTCATTGTCCAAATTTGGAAGTTCCTTTGATTTCTAATGGTAAAGTAGCACCTCCTTTCAATGTCACCACATGCTGGTACAAGGATGATCATTGA 609 0.3481 MMAYIPLGLSTCTQNHQSEVASYTKTQIFGIFFIVVIVFGLLFSLLLSFGLSPETTFNIVEASIVHFNITSNNTLYYNFKVTVAAKNFEDDIKSYDKVTAIASYKGNQLASVKMAPFKLSGKNIVRLEPIVFEGNNVMTFEPQQLAKYNKETQLGIYNLDMDLDLDYFRNHIHCPNLEVPLISNGKVAPPFNVTTCWYKDDH 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00389 202 PANTHER OS05G0367900 PROTEIN 28 179 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00389 Trre-Chr15 2721502 2722110 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00389 52 167 SNARE and Associated Proteins AT1G32270 27.350 1.34e-11 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00389 - - tpra:123886814 253.062