Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00385 ATGTCAAAAACTAATCAATCTGAGGAATCTATACATGGATCGATTTGTTTAATTCTCTTAGTTCTTGCCATACCTATTACTATTAGCTTGATAATAATACTCTCATTTAAGCCTCCAACCAAATTCAGCATAGATGAAGCCTCGATCACACAATTCAATCTCATAAATAACAACACCTTGTATTATAATTTTAAGGTCATCATTACAGCAAGAAACTTCCACGACAGAATAAAATATTATAAAAAGGGATTGAATGCAATTTTTACATATAAAGGTAATACCTTGGCTTGGGTGAAAATGGAACCTTTTGCTATAGGTCGTAAGAATATTGTTACACTTCAGCCTATAGTGCTTGCAGGGAATAGTGTGATGAAACTTGAGCCTCAACAACTTGTTGAGTATAATATGGAGACACAATTAGGAATTTACGAAATAAATTTGGACTTACTTACAAAAGTGCATTGTCCAAGTTTGAAAATTCCTTTAATTTCCAACGGTAAACTAGCACCTACTTACAATATCACTGCATGCTCGAACAAGGATGATTATGATAATGATGTATCATCTTATTGA 573 0.3264 MSKTNQSEESIHGSICLILLVLAIPITISLIIILSFKPPTKFSIDEASITQFNLINNNTLYYNFKVIITARNFHDRIKYYKKGLNAIFTYKGNTLAWVKMEPFAIGRKNIVTLQPIVLAGNSVMKLEPQQLVEYNMETQLGIYEINLDLLTKVHCPSLKIPLISNGKLAPTYNITACSNKDDYDNDVSSY 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00385 190 PANTHER OS05G0367900 PROTEIN 15 154 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00385 Trre-Chr15 2701066 2701638 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00385 41 149 SNARE and Associated Proteins AT1G32270 26.606 2.40e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00385 - - tpra:123886814 181.8