Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00383 ATGGGTTCACTTCCTAGAGATGAACCATCATATTCTCCAACCTCTCACCATCTTAGCATGTTGCAACAAGTTATTTATGGCAGTGATATAAAAAATCGCTTGATTCAAAGTTACAAGAGGAGTTTTAATGGTTTTTCTGCCATACTCAATGATCAACAGAGGGAAAAACTTGTTGGCATGAAAGGTGTTGTCTCAGTATTTCCAAGCCAAGAGTATCACCTTCAAACCACAAGATCGTGGGACTTTCTGGGTTTACCTCTATCAATCAAAAGAGGTAAAACTGTTGAGAGTGATTTGGTGATTGGAGTCATAGACAGCGGAATTTGGCCAGAATCTAAAAGTTTTAATGATAAAGGTCTTGGTCCTATTCCAAAAAAATGGAGGGGAGTTTGTGCAGGTGGTGGTAATTTTAGTTGCAACAATAAGATTATCGGAGCTCGATGGTATCCTGGTGGTGAGAGTGAGAGTGCAAGAGACCATCATGGTCATGGAACACATGTCGCATCAACATTAGGCGGAAGAAGGATAAAGGGTGTGAGCTATTATGGTATGGCAAAAGGCACCATAAGAGGTGGAGTTCCATCTTCAAGGATTGCTGTATATAAAGTTTGTAACCGATTATGTCGTGATGATAATATTTTAGCAGCTTTTGATGATGCCATAGCTGATGGAGTTGACATCATTAATATATCTCTTGGAAACGAAACTGTTGGTGATTTTCTTAAAGATACTCTAGCTATTGGTTCTTTTCATGCCATGGAAAAAGGAATACTCACGGTGCAGGCAGCAGGCAACTATGGTCCTAACCCAAGTACTGTTACAAGTGCAGCACCTTGGTTATTTAGTGTTGCTGCAACTACCATAGATCGTCAATTCATTGATAAACTCATTCTTGGAAATGGAAAGACTTTCATTGGAAAATCGATTAATATTGTACCCTCAAATGGCACAAAATTTCCAATAGTTGTGTGCAATGCTACGTCTTGCCATGGAGATTTTACATCCCCCGAAAAATGTCCATGTATAGACAAAAAAATTGTTAAGGGTAAGATTGTTTTGAGTGGAGATGCCTCTGGTGGAAATATTGCTTATCCACATGGGGCTGTTGGTTCAATTCTTAATTTTACATATGATGCTTCTATTATCACTCATAGACCTTCACTTAGCTTGGATTCAAAAGACTTTGATCTTGTTCAATCTTACACTTACTCCACTAAATACCCTGTAGCTGAAATATTGAAGAGTGATGTCGTTCAAGATAACGCTGCTCCAAAAATTGTATCTTTCTCTTCTCGTGGTCCGAATCCCATAGTACCAGAAATTATGAAACCGGATATAAGTGCTCCTGGAGTCGATATCTTGGCTGCATATTCACCTATTGGACCAAGCCTTGATGGTTATAAGGTAAGTGAGAATTACATTATACTATTTGGTACCTCTATGGCATGTCCACATGCTGCTGGAGTTGCTGCATATGTCAAATCATTTCATCCAGATTGGTCACCTGCAGCTATCAAATCTGCCATCATGACCACGGCGAAAAAGGTTAATGGTAATTATAATGATATGGTAGGTGAGTTCGCTTATGGATCTGGAAATGTTAATCCACAACAAGCTCTACACCCTGGACTAGTTTATGACATTACTAAGCAAGATTATATGCAAATGCTTTGTAATTTTGGTTATAATGATACCAAACTTGAACAAATTAGTGGAGAAAAATCTAGTTGCCATGGAGCTTCGAATAGATATTTGGTGAAAGATATAAATTATCCTGCACTGGTGGTTCTTGTTAGGTCTCATAGGCATTTTAGAGCTAAGATTCATAGAACAGTGACAAACGTTGGCTCTCCTAACTCAAGCTACACGGCTACTATCATCTCAATTCCAAAAATCAAGATTAAAGTGGTGCCAAAACTTCTCTCGTTCAAATCCTTACATGAGAAACAATCCTTTGTTGTCATTGTTACCGGAGGAACAAACTCAAATCAAACTGTGTTTTCTTCATCACTTGTTTGGTCAGATGGAACCCACAATGTAAAGAGTCCAATCATTATACAAAGACTCTCTTAA 2073 0.3845 MGSLPRDEPSYSPTSHHLSMLQQVIYGSDIKNRLIQSYKRSFNGFSAILNDQQREKLVGMKGVVSVFPSQEYHLQTTRSWDFLGLPLSIKRGKTVESDLVIGVIDSGIWPESKSFNDKGLGPIPKKWRGVCAGGGNFSCNNKIIGARWYPGGESESARDHHGHGTHVASTLGGRRIKGVSYYGMAKGTIRGGVPSSRIAVYKVCNRLCRDDNILAAFDDAIADGVDIINISLGNETVGDFLKDTLAIGSFHAMEKGILTVQAAGNYGPNPSTVTSAAPWLFSVAATTIDRQFIDKLILGNGKTFIGKSINIVPSNGTKFPIVVCNATSCHGDFTSPEKCPCIDKKIVKGKIVLSGDASGGNIAYPHGAVGSILNFTYDASIITHRPSLSLDSKDFDLVQSYTYSTKYPVAEILKSDVVQDNAAPKIVSFSSRGPNPIVPEIMKPDISAPGVDILAAYSPIGPSLDGYKVSENYIILFGTSMACPHAAGVAAYVKSFHPDWSPAAIKSAIMTTAKKVNGNYNDMVGEFAYGSGNVNPQQALHPGLVYDITKQDYMQMLCNFGYNDTKLEQISGEKSSCHGASNRYLVKDINYPALVVLVRSHRHFRAKIHRTVTNVGSPNSSYTATIISIPKIKIKVVPKLLSFKSLHEKQSFVVIVTGGTNSNQTVFSSSLVWSDGTHNVKSPIIIQRLS 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00383 690 ProSitePatterns Serine proteases, subtilase family, serine active site. 478 488 IPR023828 -
Trre15g00383 690 PRINTS Subtilisin serine protease family (S8) signature 96 115 IPR015500 -
Trre15g00383 690 PRINTS Subtilisin serine protease family (S8) signature 477 493 IPR015500 -
Trre15g00383 690 PRINTS Subtilisin serine protease family (S8) signature 159 172 IPR015500 -
Trre15g00383 690 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 33 685 IPR045051 -
Trre15g00383 690 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 75 IPR037045 -
Trre15g00383 690 Gene3D - 557 689 - -
Trre15g00383 690 SUPERFAMILY Subtilisin-like 87 544 IPR036852 GO:0004252|GO:0006508
Trre15g00383 690 Pfam Peptidase inhibitor I9 12 74 IPR010259 -
Trre15g00383 690 Gene3D - 289 419 - -
Trre15g00383 690 CDD PA_subtilisin_like 296 412 - -
Trre15g00383 690 Gene3D Peptidase S8/S53 domain 98 553 IPR036852 GO:0004252|GO:0006508
Trre15g00383 690 FunFam Subtilisin-like protease SBT1.5 98 298 - -
Trre15g00383 690 ProSitePatterns Serine proteases, subtilase family, histidine active site. 163 173 IPR022398 -
Trre15g00383 690 Pfam Fibronectin type-III domain 588 686 IPR041469 -
Trre15g00383 690 Pfam Subtilase family 97 531 IPR000209 GO:0006508|GO:0008236
Trre15g00383 690 CDD Peptidases_S8_3 72 513 IPR034197 -
Trre15g00383 690 ProSiteProfiles Serine proteases, subtilase domain profile. 71 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00383 Trre-Chr15 2687554 2690307 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00383 1 686 Subtilisin-like Serine Gene Family AT3G46850 51.788 0.0 707
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00383 - - psat:127076787 868.996