Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00380 ATGGTCAAGTATCATGCAGTTGTTTTATTCTTCTTTGTGTCGTTGGTTTGGGCATCAATAGTTTCTTTCATGTGTGATGCCATTAAAAGTGGCGATGAAACCAGTAAACTTTACATTGTATATATGGGCTCACTTCCTGAGGAAGCATCATATTCTCCAACCTCTCACCATCTTAGTATGTTGCAACAAGTTGTTTATGGCAGTGATATAGAAAATCGCTTGGTTCAAAGTTACAAGAGGAGTTTTAATGGATTTTCTGTCATACTCAATGATCAACAAAGGGAAAAACTTGTTGGCATGAAAGATGTTGTTTCGGTGTTTCCAAGTCAAGAGTATCACCTTCAAACCACAAGATCGTGGGACTTCCTTGGTTTACTTCAATCAATAAAAAGAAGTAAAACTGTTGAGAGTAATTTGGTGATTGGGGTCATAGACACCGGAATATGGCCAGAATCTAAAAGTTTTAACGATAAAGGTCTTGGTCATATTCCAAAAAAGTGGAGGGGAGTTTGTGCAGGTGGCGGTAACTTCAGTTGCAACAATAAGATAATCGGAGCTCGATGGTATCCTGGTAGTGAGGGTGAGAGTGCAAGAGATAATCATGGTCATGGAACATATGTCGCATCAACAGTAGGCGGTAGAAGGGTCAAGGGTATGAGCTATCATGGCATTGCAAAAGGCACCATAAGAGGTGGAGTTCCATCTTCAAGGATAGCTGTATACAAAGTTTGTAACCCAGATTGTCGTGGTGATAATATTTTAGCAGCTTTTGATGATGCCATTGCTGATGGAGTTGACATCATTAGCATATCTCTTGGTAACGAAAATGCTGTTGAAATTCTTAAAGATACTCTTGCTATTGGTTCTTTTCATGCCATGGAAAAAGGAATACTCACAGTGCATGCAGCAGGCAACTCTGGTCCCAACCCAAGTACTATTTCGAGCGTAGCACCTTGGTTATTTAGTGTTGCCTCAACTACCATAGATCGCCAATTCATTGATAAACTCATTCTTGGAAATGGAAAGACTTTTATTGGCAAGTCGATTAATGTTGTCTCCTCAAATGGAACTAAATTTCCGATAGTTGTGTGTAATGCTACGACTTGCCATAAAGATTATACATCCCCTAAAAAATGTCCATGTATAGACAAAAAACTGGTAAAGGGTAAGATTGTTTTGAGTGGAGATCCAGGTGGTGGAGATTTGGCTTATCCATATGGGGCAATTGGTTCAATCCTTAATTCTACATTTGATGCGTCTATTACTCATCGACCTTCACTAAACTTGGATTCAAAAGACTTTGATCATGTTCAATCCTACACTTACTCCACTAAATACCCTGTAGCTGAAATATTGAAGAGTCATGTCGTTCAAGACACCACTGCTCCTAAAGTTGCATCTTCGTCTTCTCGTGGTCCAAATCCTATTGTACCAGAAATTATGAAACCAGACATAGGTGCCCCTGGAGTCAATATCTTGGCTGCATATTCACCTAACGGACGAATGCCTGATGAGGAAATTGATAACATACATGAGAAATACATCATAGCATCTGGTACCTCGGTGGCATGTCCCCATGCTGCTGGTGTTGCCGCATATGTCAAATCATTTCATCCAGATTGGTCACCTGCAGCTATCAAATCGGCCATCATGACCACGGCGAAACCAGTGAATGATACTTATAATGATATGGTAGGTGAGTTTGCTTATGGATCTGGAAATATCAATCCACAACAAGCTCTTCACCCTGGACTGATTTATGACATAACTAAGCAAGATTATATGCAAATGCTTTGTAATTTTGGTTATACTGATACCAAAGTTGAACAAATTAGTGGAGAAAAATCAAGTTGTCATGGAGCTTCAAATAGATATTTGGTGAAAGATATAAATTATCCTGCAATGGTGTTTCTTGTTAGATCTCATAAGCGTTTTAGTGCTAAGATTCGTAGAACAGTGACAAACGTTGGCTCTCCTAACTCAAGCTACGCAGCTACTACCTTTCCAATTCCAGAAATCAAGATTAAAGTGGTGCCAAAACTTCTCTCGTTCAAATCCTTACATGAGAAACAATCTTTTGTTGTCAGTGTTACCGGAAGAACAAAATCAAACCAAACTATGTTTTCTTCGTCACTTATTTGGTCAGATGGAACCCACAATGTCAAGAGTCCAATCATTATACAAATACTCTCTTAA 2196 0.3912 MVKYHAVVLFFFVSLVWASIVSFMCDAIKSGDETSKLYIVYMGSLPEEASYSPTSHHLSMLQQVVYGSDIENRLVQSYKRSFNGFSVILNDQQREKLVGMKDVVSVFPSQEYHLQTTRSWDFLGLLQSIKRSKTVESNLVIGVIDTGIWPESKSFNDKGLGHIPKKWRGVCAGGGNFSCNNKIIGARWYPGSEGESARDNHGHGTYVASTVGGRRVKGMSYHGIAKGTIRGGVPSSRIAVYKVCNPDCRGDNILAAFDDAIADGVDIISISLGNENAVEILKDTLAIGSFHAMEKGILTVHAAGNSGPNPSTISSVAPWLFSVASTTIDRQFIDKLILGNGKTFIGKSINVVSSNGTKFPIVVCNATTCHKDYTSPKKCPCIDKKLVKGKIVLSGDPGGGDLAYPYGAIGSILNSTFDASITHRPSLNLDSKDFDHVQSYTYSTKYPVAEILKSHVVQDTTAPKVASSSSRGPNPIVPEIMKPDIGAPGVNILAAYSPNGRMPDEEIDNIHEKYIIASGTSVACPHAAGVAAYVKSFHPDWSPAAIKSAIMTTAKPVNDTYNDMVGEFAYGSGNINPQQALHPGLIYDITKQDYMQMLCNFGYTDTKVEQISGEKSSCHGASNRYLVKDINYPAMVFLVRSHKRFSAKIRRTVTNVGSPNSSYAATTFPIPEIKIKVVPKLLSFKSLHEKQSFVVSVTGRTKSNQTMFSSSLIWSDGTHNVKSPIIIQILS 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00380 731 ProSiteProfiles Serine proteases, subtilase domain profile. 111 581 - -
Trre15g00380 731 Pfam Peptidase inhibitor I9 38 114 IPR010259 -
Trre15g00380 731 Gene3D Peptidase S8/S53 domain 139 594 IPR036852 GO:0004252|GO:0006508
Trre15g00380 731 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 38 726 IPR045051 -
Trre15g00380 731 CDD PA_subtilisin_like 336 451 - -
Trre15g00380 731 PRINTS Subtilisin serine protease family (S8) signature 199 212 IPR015500 -
Trre15g00380 731 PRINTS Subtilisin serine protease family (S8) signature 136 155 IPR015500 -
Trre15g00380 731 PRINTS Subtilisin serine protease family (S8) signature 518 534 IPR015500 -
Trre15g00380 731 CDD Peptidases_S8_3 112 554 IPR034197 -
Trre15g00380 731 ProSitePatterns Serine proteases, subtilase family, histidine active site. 203 213 IPR022398 -
Trre15g00380 731 SUPERFAMILY Subtilisin-like 114 585 IPR036852 GO:0004252|GO:0006508
Trre15g00380 731 Gene3D - 329 458 - -
Trre15g00380 731 Pfam Fibronectin type-III domain 629 727 IPR041469 -
Trre15g00380 731 Gene3D - 598 730 - -
Trre15g00380 731 Pfam Subtilase family 137 573 IPR000209 GO:0006508|GO:0008236
Trre15g00380 731 ProSitePatterns Serine proteases, subtilase family, serine active site. 519 529 IPR023828 -
Trre15g00380 731 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 115 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00380 Trre-Chr15 2626620 2629697 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00380 8 727 Subtilisin-like Serine Gene Family AT3G46850 50.954 0.0 723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00380 - - psat:127076787 919.842