Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00378 ATGGCTTCCTCAGCTGATAAATTTTACACATTCTTTGTTCTTCTCAGCCTTGCACTCCTCCTTTTATCCACACGGGAGGTACAAGGAAATCTTTGTCAAAGGCCCAGCATAACATGGTCAGGGCCTTGTTTAGAGACTGCAAACTGTAAAGATCAATGCATCAGCGTGGAACATGCTACTTTTGGGGCTTGTCACCGTGATGGTCTTGGTTTTTCTTGCTTTTGCTACTTCAACTGTTGA 240 0.4375 MASSADKFYTFFVLLSLALLLLSTREVQGNLCQRPSITWSGPCLETANCKDQCISVEHATFGACHRDGLGFSCFCYFNC 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00378 79 Pfam Gamma-thionin family 31 79 - -
Trre15g00378 79 PANTHER DEFENSIN-LIKE PROTEIN 1 1 76 - -
Trre15g00378 79 Gene3D - 31 79 IPR036574 -
Trre15g00378 79 SMART gth_4 31 79 IPR003614 GO:0006952
Trre15g00378 79 SUPERFAMILY Scorpion toxin-like 30 79 IPR036574 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00378 Trre-Chr15 2597186 2598221 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00378 1 79 Plant Defensins Gene Families AT1G19610 46.341 1.03e-18 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00378 - - mtr:25500300 118.627