Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00377 ATGATTCCATCTGCTAGTAAATTCTACATGTTCCTCTGTCTTGTTTTTCTCCTTATCTCCTCATGTGAACCGGAACCAAAACTTTGTGGAAGGCCAAGTAGAACATATTCAGGTCCTTGCACTGACTGGGACTGTGATAAAGAATGCATTGACTCAGAATTGGATGCAATGTTAGGTTCTTGTGAAGGCTCTTATTGCTTCTGTTTTTTCAGTTGTTGA 219 0.3973 MIPSASKFYMFLCLVFLLISSCEPEPKLCGRPSRTYSGPCTDWDCDKECIDSELDAMLGSCEGSYCFCFFSC 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00377 72 SMART gth_4 28 72 IPR003614 GO:0006952
Trre15g00377 72 Gene3D - 25 72 IPR036574 -
Trre15g00377 72 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Trre15g00377 72 Pfam Gamma-thionin family 27 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00377 Trre-Chr15 2595553 2595876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00377 2 72 Plant Defensins Gene Families AT1G19610 35.443 1.35e-07 42.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00377 - K11835 lsv:111895712 56.6102