Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00375 ATGACTTCCTCTGCTACTAAATTCTACACCATCTTCGTGTTCATCTGTCTTGTCCTTCTTATTGGAACAATGGAGGTGGAAGCAAGAAGTTGTCAAAAGATTGTTCCCAAAAAAATTTGTCAAAAGAGAAGCAAAACATGGACAGGGCTTTGTCTTATAACTGGAAACTGTAAAAAACAGTGCATCAAAGTGGAGAAAGCAACTTTTGGTGCTTGTCATCGTCAAGGCTTTGGTTTTGCATGCTTCTGCTACTTCAAATGCTGA 264 0.3902 MTSSATKFYTIFVFICLVLLIGTMEVEARSCQKIVPKKICQKRSKTWTGLCLITGNCKKQCIKVEKATFGACHRQGFGFACFCYFKC 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00375 87 PANTHER DEFENSIN-LIKE PROTEIN 1 1 87 - -
Trre15g00375 87 SUPERFAMILY Scorpion toxin-like 38 87 IPR036574 -
Trre15g00375 87 Gene3D - 39 87 IPR036574 -
Trre15g00375 87 ProSitePatterns Gamma-thionins family signature. 38 61 IPR008176 GO:0006952
Trre15g00375 87 SMART gth_4 39 87 IPR003614 GO:0006952
Trre15g00375 87 Pfam Gamma-thionin family 38 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00375 Trre-Chr15 2578114 2578508 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00375 9 87 Plant Defensins Gene Families AT1G19610 50.000 1.25e-21 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00375 - - mtr:25500300 129.413