Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00374 ATGATTTCCTCTGCTAGTAAATTCTACATGTTCCTTTGTCTTATTCTTCTCCTTATTTCCTCATGTGAGGTGGAAGCAAAACTTTGTGGAAGGCCAAGTAGAACATGGTCAGGTCCTTGTATTGACTGGGACTGTGATAAAGAGTGTATCGATTCGGAGTTAGATGCAATGTTAGAGAAAATCATGACTTCCTTTTCTAGTAAATTCTACATTGTCTTCATGCTCTTATGTCTTGTCCTTCTCCTTATTTCCAATTGTGATGTGGAAGCAAAATTTTGTGGAGAGCCAAGTCTAACATTTTCAGGAAAATGTGACATTAATAACACTCGATTCTGTGATGAACACTGCATTAACATGGAGTTTGCGGCATACGGTGTTTGTTTCGCTAATGGTGGTTTAGATTGCTTCTGCTATATCGAGTGTTGA 426 0.3826 MISSASKFYMFLCLILLLISSCEVEAKLCGRPSRTWSGPCIDWDCDKECIDSELDAMLEKIMTSFSSKFYIVFMLLCLVLLLISNCDVEAKFCGEPSLTFSGKCDINNTRFCDEHCINMEFAAYGVCFANGGLDCFCYIEC 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00374 141 SUPERFAMILY Scorpion toxin-like 90 141 IPR036574 -
Trre15g00374 141 PANTHER DEFENSIN-LIKE PROTEIN 1 62 138 - -
Trre15g00374 141 SMART gth_4 92 141 IPR003614 GO:0006952
Trre15g00374 141 Gene3D - 24 57 IPR036574 -
Trre15g00374 141 Gene3D - 88 141 IPR036574 -
Trre15g00374 141 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00374 Trre-Chr15 2572629 2574894 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00374 70 141 Plant Defensins Gene Families AT1G19610 39.474 1.36e-10 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00374 - K01758 mtr:25500300 87.8113