Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00371 ATGGCTTTCTTTGCTAGCAAACTCTACAACGTCTTCATGTTCCTATGTCTTGTCCATCTTCTCCTTCTTTCCTCATGTGAAGTGGAAGCAAAACTTTGTAGAAGCAAAAGTAGAACATGGTCGGGGCCTTGTATTAATAACTCATCATGTAGTACAAAATGCAAGCAATCGGAGCATGCAAGTTATGGTTCTTGTCAACGCAATGGTTTTTGCTTTTGCTACTTTAATTGTTCATGA 237 0.3882 MAFFASKLYNVFMFLCLVHLLLLSSCEVEAKLCRSKSRTWSGPCINNSSCSTKCKQSEHASYGSCQRNGFCFCYFNCS 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00371 78 PANTHER DEFENSIN-LIKE PROTEIN 1 11 74 - -
Trre15g00371 78 SMART gth_4 32 77 IPR003614 GO:0006952
Trre15g00371 78 Pfam Gamma-thionin family 31 77 - -
Trre15g00371 78 Gene3D - 28 77 IPR036574 -
Trre15g00371 78 ProSitePatterns Gamma-thionins family signature. 31 54 IPR008176 GO:0006952
Trre15g00371 78 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Trre15g00371 78 SUPERFAMILY Scorpion toxin-like 30 77 IPR036574 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00371 Trre-Chr15 2561906 2562245 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00371 9 77 Plant Defensins Gene Families AT1G19610 45.946 6.83e-16 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00371 - - lja:Lj3g3v0720000.1 83.1889