Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00368 ATGACTTTCTCCGCAAGTAAATTCTACACCATTTTCATATTCTTCTATCTTGCCATTCTCCTTATTTCCACATGTGATGTTGAACGAAGACTTTGTGGAACACTATGTAAAACATGGTCCGATCCTTGTATTATTAACGCGGCGTGTAATGAAGAGTGTCGTGAATCGGAATCAAAACGTTATTTACATTTTGAAATAATGAATTCCTCTTTGAGTAAATTCTATACCATCTTCATGTTCCTCTGTTTTGTCCTTCTCATTTCCACATGTGGGGTTGAAGCAAAACTTTGTGAAAAGCTAAGTAAAACATGGTCAGGGCCTTGCATTATTAACTCGCCCTGTAATGAAATGTGCCGCAAATTGGAGTATGCAAAATTCGGCAATTGTTTTTTGCTATGGACTTCGACGAAGATGCTATCCAAGAAGAAGAATTGGGCCTATAATGTATGGGGACTGATCAGTGCATTTTGA 471 0.3779 MTFSASKFYTIFIFFYLAILLISTCDVERRLCGTLCKTWSDPCIINAACNEECRESESKRYLHFEIMNSSLSKFYTIFMFLCFVLLISTCGVEAKLCEKLSKTWSGPCIINSPCNEMCRKLEYAKFGNCFLLWTSTKMLSKKKNWAYNVWGLISAF 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00368 156 Gene3D - 92 138 IPR036574 -
Trre15g00368 156 Pfam Gamma-thionin family 95 129 - -
Trre15g00368 156 PANTHER DEFENSIN-LIKE PROTEIN 1 67 129 - -
Trre15g00368 156 ProSitePatterns Gamma-thionins family signature. 95 118 IPR008176 GO:0006952
Trre15g00368 156 SUPERFAMILY Scorpion toxin-like 94 131 IPR036574 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00368 Trre-Chr15 2536264 2538882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00368 71 129 Plant Defensins Gene Families AT1G19610 36.508 5.98e-08 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00368 - - mtr:25500300 88.9669