Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00367 ATGAATTCATCTGTTAGTAAATTCTACACCATCTTCATGTTCCTCTGTCTCGTCCTTCTCATTTCCACATGTGAGATTGAAGCAAGACTTTGTGGAAAAGTAAGTAAAACATGGTCCGGGCCTTGTATTTTTAACGCGTCTTGTAATGCACAGTGCCTCGAATCGGAGTTCGCAAGCTACGGTGCTTGTGCACGCTTTGATTGCTACTGCTTTTTCGAATGTTGA 225 0.4222 MNSSVSKFYTIFMFLCLVLLISTCEIEARLCGKVSKTWSGPCIFNASCNAQCLESEFASYGACARFDCYCFFEC 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00367 74 ProSitePatterns Gamma-thionins family signature. 29 52 IPR008176 GO:0006952
Trre15g00367 74 SMART gth_4 30 74 IPR003614 GO:0006952
Trre15g00367 74 Pfam Gamma-thionin family 29 74 - -
Trre15g00367 74 SUPERFAMILY Scorpion toxin-like 29 74 IPR036574 -
Trre15g00367 74 Gene3D - 26 74 IPR036574 -
Trre15g00367 74 PANTHER DEFENSIN-LIKE PROTEIN 1 1 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00367 Trre-Chr15 2533194 2533518 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00367 9 74 Plant Defensins Gene Families AT1G19610 43.243 2.09e-13 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00367 - - mtr:25500300 92.4337