Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00363 ATGAATTCATCTGTTAGTAAATTCTACACCATCTTCATGTTCCTCTGCCTTGTCCTTCTCATTTTCACATGTGAGATCGAAGCAAGACTTTGTGGAAAAGTAAGTAAAACATGGTCCGGGCCTTGTATTTTTAACGCGTATTGTAACGCAGAGTGCCTCGAATCGGAGTTTGCAACATACGAAATCATGAATTCATTTGCTAGTAAATTCTACATCATCTCCATGTTGTTCCTCTGTCTTGTCCTTCTCCTTATAATTTCCATATGTGAAGTGGAAGCTGAACTTTGTAAAGAGAAAAATAACATCATTTACAAAATTATGAATTCATCTGCTAGAAAATTCTATGTTTTGGGACAAATTATGAATTCTATGTTCTTTTGTCTTGTCATCATTCTCCTTATTTCCACATGTGAGCCAATGGGAATATTTCAACGTCGTTGTGGTGAGAAAAGTCAAATATGGGAAGAAAAACATTGTTATATTTTTGAAAACTCAGATAAGTCAAAATGTAATTCAACATGTGTCAATCTGGAGCATGCAATGTTTGGTACTTGTCAATTTATTCAAGATCCGGGTCTTGTAGCAACTTGTTACTGCACGTTTAATTGCACTGAATATATACCACGAGATTGA 633 0.3507 MNSSVSKFYTIFMFLCLVLLIFTCEIEARLCGKVSKTWSGPCIFNAYCNAECLESEFATYEIMNSFASKFYIISMLFLCLVLLLIISICEVEAELCKEKNNIIYKIMNSSARKFYVLGQIMNSMFFCLVIILLISTCEPMGIFQRRCGEKSQIWEEKHCYIFENSDKSKCNSTCVNLEHAMFGTCQFIQDPGLVATCYCTFNCTEYIPRD 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00363 210 ProSitePatterns Gamma-thionins family signature. 29 52 IPR008176 GO:0006952
Trre15g00363 210 Gene3D - 143 203 IPR036574 -
Trre15g00363 210 Gene3D - 27 62 IPR036574 -
Trre15g00363 210 PANTHER DEFENSIN-LIKE PROTEIN 1 1 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00363 Trre-Chr15 2496873 2502864 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00363 9 60 Plant Defensins Gene Families AT1G19610 39.286 9.92e-06 40.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00363 - K04550 mtr:25500300 73.1738