Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00349 ATGGCTGAAAAATATGGTTCAGTCTTTTCCCTTAGGCTTGGTTGTCACAATACCCTAGTGGTGAGTAGTAGGGAAATAGCCAAAGAATGTCTCACAAAAAATGACCAAGTTTTTGCCTCAAGGCCTAATGTAGCCGCAGGTAGATACTTAGGTTACAATAATGCTATTTTAGCTCTTGCCCCTTATGGTGATTATTGGAGATATATGAGAAAAAATGCCACTATTGAGCTTTTATCAAGTCATAGACTTGAAAAGCTAAAGCATGTTAGAGATTTAGAGATATATTCTCTACTAAAAAATTTGTACACGTTTGTGAAAAATTCAAATGGTGCAATTGAAGTACCTATTAGCAAATATTTAGATCATATGACATTTAATATAATTGTAAGGATGATAGCTGGGAAAAGATTTGGAGGTGAAACAATAAATCAAGAAGATAGTGAGGCATGGAGATTAAGGAATGCAATTAAAGATGCAACATATCTAAGTGGTGTTTTTGTGTTGGCTGATGCTATTCCTTTCCTTAGTTGGTTTGATTTTCAAGGCCATGTGGGTTTCATGAAGAGGACTTTTAAGGAAATGGACTTTATTCTTGATAAGTGGATGCATGAGCATTTTAGAAAGAGAGATGAGGGACAAAATGGTAAAAGCCAAGATGATTTCATGGATGTGTTGATATCAATGTTTGAAGAGCATGATGAAATTTGTGGCCACAAACGAGAGGTAGTTATCAAAGCAACAGCCATGATATTAATCCTTACAGCCTCAGGAAGCACAGCAATAACACTAGGATGGGCTCTCTCCCTTCTTATAAACCATCCAAAGGTCTTAAAACAAGCCCAACAAGAATTGGACACCAACATAGGAAAACATAAATGGGTCCAAGAATCTGACATCAAAGATCTCAAATATCTTCAGTCCATTATCAAAGAGACACTTAGGTTATACCCACCAGCACCCTTAACTGGAATAAGAGAAGCCACTGATGATTGCCACGTGGCAAGCTACCATATCCCTAAAGGCACACGTTTGCTTATTAACCTATGGAAATTGCAAAGGGACCCACAAATATGGTCAAACCCTAATGAATTTCAACCTGAGAGATTTTACAACACTTTTGATCAAATTGATTTTCAAAATCAAGATTTTGGGTATGTGCCATTTAGCTATGGAAGAAGGTCATGTGCTGGTGCAACATTTGGGTTGCAAGTGTTGCATTTGACTCTAGCTAGGTTGATTCAAGGTTTTGATATATACACAAAAGAAGGTGTTGTTGATATGAATGAAGGATTAGGATTAGCTTTGCCTAAGGAAAATCCACTTGAGGTTATGTTACAACCACGTCTTCCATTGGAGCTTTATGGAAGTCTTTGA 1374 0.3705 MAEKYGSVFSLRLGCHNTLVVSSREIAKECLTKNDQVFASRPNVAAGRYLGYNNAILALAPYGDYWRYMRKNATIELLSSHRLEKLKHVRDLEIYSLLKNLYTFVKNSNGAIEVPISKYLDHMTFNIIVRMIAGKRFGGETINQEDSEAWRLRNAIKDATYLSGVFVLADAIPFLSWFDFQGHVGFMKRTFKEMDFILDKWMHEHFRKRDEGQNGKSQDDFMDVLISMFEEHDEICGHKREVVIKATAMILILTASGSTAITLGWALSLLINHPKVLKQAQQELDTNIGKHKWVQESDIKDLKYLQSIIKETLRLYPPAPLTGIREATDDCHVASYHIPKGTRLLINLWKLQRDPQIWSNPNEFQPERFYNTFDQIDFQNQDFGYVPFSYGRRSCAGATFGLQVLHLTLARLIQGFDIYTKEGVVDMNEGLGLALPKENPLEVMLQPRLPLELYGSL 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00349 457 PRINTS E-class P450 group I signature 395 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00349 457 PRINTS E-class P450 group I signature 123 141 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00349 457 PRINTS E-class P450 group I signature 2 21 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00349 457 PRINTS E-class P450 group I signature 263 289 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00349 457 PRINTS E-class P450 group I signature 347 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00349 457 PRINTS E-class P450 group I signature 385 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00349 457 PRINTS E-class P450 group I signature 26 47 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00349 457 PRINTS E-class P450 group I signature 306 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00349 457 Gene3D Cytochrome P450 1 448 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00349 457 CDD CYP82 6 448 - -
Trre15g00349 457 PANTHER CYTOCHROME P450 82C3-RELATED 1 454 - -
Trre15g00349 457 Pfam Cytochrome P450 2 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00349 457 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 388 397 IPR017972 GO:0005506|GO:0016705
Trre15g00349 457 SUPERFAMILY Cytochrome P450 1 448 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00349 457 PRINTS P450 superfamily signature 307 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00349 457 PRINTS P450 superfamily signature 254 271 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00349 457 PRINTS P450 superfamily signature 395 406 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00349 457 PRINTS P450 superfamily signature 386 395 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g00349 457 FunFam Cytochrome P450 82C4 1 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00349 Trre-Chr15 2415766 2418550 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00349 1 454 Cytochrome P450 AT4G31970 46.253 3.36e-150 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00349 K17961 - gmx:100787489 675.626